DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and AT5G10370

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_196599.2 Gene:AT5G10370 / 830901 AraportID:AT5G10370 Length:1775 Species:Arabidopsis thaliana


Alignment Length:1388 Identity:238/1388 - (17%)
Similarity:420/1388 - (30%) Gaps:524/1388 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QVVHVNGNSCVKVYKQACRHYLEEPKTLVLSSGATLN--MFTLLSRKSLMGKEDLELYAD----- 108
            |||..:....:|......:..:|..:.||::.....|  |.::|  :.|:|::..|...|     
plant   213 QVVSFSSKRGLKFEVFEKKKAIEAERDLVVNRLEEFNNAMKSIL--RYLIGQDGYEFDLDDEEEG 275

  Fly   109 --LVSMKANASDLPSLH-------------LPLPAIRPPNLRFWTEAQLNFLTAFLGHSLSDEIL 158
              .|.....|.|...:|             ||:.|.|...|:.....|:..|....|...|.:::
plant   276 DVAVFCLEGAYDWRRIHCLIRRECRRLEDGLPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLV 340

  Fly   159 QSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAILATYNSQRTANFFGEQL 223
            |.|..|.|....:.:|........:.:.|..|.:.|.    |.|...:..|              
plant   341 QFLADSGVAASESIVCTQPRKIAAMTLADRVREESSG----CYEENTVSCT-------------- 387

  Fly   224 GETVGIQLPYFSAVSS-STFIIYSTAQYFLRS-LTSQQFRNISHLVVNDVHLHDPYTDILLSEIR 286
                    |.||:... |:.::|.|....|:. :..:....||.:::::.|.....||:||:.::
plant   388 --------PTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLK 444

  Fly   287 MALSSHQNLRVVLLSQMGNPKKFTDFF---------GEGLQLNMIKQPEVAPRVSYLNELHSCIA 342
            ..||...:||:|::|...:.|:.:.:|         |....:.::..|......|.:..:.|.:.
plant   445 KLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEENSVVGGIASYVG 509

  Fly   343 LAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLT 407
                    |:.|...|..:....               ||..|.                   ||
plant   510 --------DVVKMAVEIHKTEKE---------------GTILAF-------------------LT 532

  Fly   408 GKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVVKS 472
            .:..|.:|.|                    .....:||:|                .|||     
plant   533 SQAEVEWACE--------------------RFITPSAIAL----------------PLHG----- 556

  Fly   473 AKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLTGSLQECSI 537
                                                         ||::.          ::..:
plant   557 ---------------------------------------------KLSFE----------EQFRV 566

  Fly   538 FLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKVP-FKYQIDTACRLNNVYDTTSCSGDD 601
            |..:...|               ||:.||:|.|: .|.:| .||.||:.....:.|:..:.....
plant   567 FQNHPGRR---------------KVIFATNIAET-SLTIPGVKYVIDSGMVKESKYEPRTGMSIL 615

  Fly   602 RFEWVAKDALLRRELILQPNKGDVQ---CFRLISKEAYEELSETSQPSLQTMQLDKICLAVKLLS 663
            :...|::.:..:|    ....|..:   |:||.||..::.::...:|.::.:.|....|.:..|.
plant   616 KVCRVSQSSARQR----AGRAGRTEPGRCYRLYSKNDFDSMNLNQEPEIRRVHLGVALLRMLALG 676

  Fly   664 PNTIISEYLGITISPPPLINVHHAVQFLKKIDVL---DDAEDVTWLGCRLMDIPVSCQLGRMLI- 724
            .|. |:|:..:....|..|.:  |||.|.::..:   :...::|..|..|:.:.:..:||:::: 
plant   677 VNN-IAEFNFVDAPVPEAIAM--AVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLILG 738

  Fly   725 --------FGILLRCLDPILTIVSSL----------STADPLGIPFTEDIDNLWDRFTIYIQNSI 771
                    .||:|..   ::...||:          ..||.|.:.|.                  
plant   739 CFRHRMGKEGIVLAA---VMANASSIFCRVGNFDDKMKADRLKVQFC------------------ 782

  Fly   772 KKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLTSIR--SEIVSS 834
                     ||..|.|..:.:||||.:....|..    |..:|..||.     .|:|  .:.|..
plant   783 ---------NQNGDLFTLLSVYKEWASLPRERRN----KWCWENSLNA-----KSMRRCEDTVKE 829

  Fly   835 L-----RAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNIYAVDTRKSSL--KSAFSG-N 891
            |     |...|:..  ...:.|.|:.:.:...:|..:...:..|: |:.|..:.|  :.|.:| .
plant   830 LEICIERELTLVSP--SYWVWNPNEGTKHDKHLKMVILASLAENV-AMYTGYNQLGYEVALTGQQ 891

  Fly   892 VSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQKS----HIVYATLVVPLAVAMFSGHP------ 946
            |.:||:..|..|.:         :..|:|.....|    ::|..|.....|:.|....|      
plant   892 VQLHPSCSLLAFGQ---------KPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPFDVSQ 947

  Fly   947 ----RIRLSPI--CDSE-------------MSLTDRNVNVFIDEWIW----------------MV 976
                |:|:..:  |.|.             :|:..|..::..||.|.                :.
plant   948 MDERRLRIKKVVGCSSTVLKRFCGKSNRSLLSIVSRARSLCSDERIGIQVDVDQNEIRLYAPPLD 1012

  Fly   977 MSKATA---------EMVMRTRYYFFKMYHD-------------LLKH----------------- 1002
            |.|.:|         :..|........:||.             .:||                 
plant  1013 MEKVSALVNDALECEKKWMHNECLEKYLYHGRGQVPIALFGSGAQIKHLEVDQRFLTVDVLYYGD 1077

  Fly  1003 --------------------------------CSELDMWRRDCEPVSQYTVLT------------ 1023
                                            |.|.:.|.|       .|.||            
plant  1078 DVVDDRELLTFLEKKIDGSICSIYKFAANKQDCDEKEKWGR-------ITFLTPESAMKATEIQK 1135

  Fly  1024 ----DTLSKIFESEDGFVGFFKPPPITFLPTPQLPSLYLLSVNAHFSWAREVEENMLSKPHHFNS 1084
                .::.|:|.|.....|.||.|             |..||.|...|.|...            
plant  1136 FYFKGSVLKLFPSLSTGGGIFKMP-------------YFSSVTAKIRWPRRES------------ 1175

  Fly  1085 HFIERQFFVLYAGGDCEEFHSRNTPAFIESVLGKFVRPIDTPNRHIFVILYRKDPDMML-----S 1144
                       :|..|.:..|.:    |..:||. :..::....::.:...::..|.:|     .
plant  1176 -----------SGRGCLKCPSGD----IHRILGD-ISSLEIGTNYVHIQRDQQSNDSILISGLGD 1224

  Fly  1145 ISRAKFVN-----------GVFMLQEYFRNNIP------------VFEILDA------CVSLNVQ 1180
            :|.|:.::           ..|:.::.:....|            :|..:.|      ||.:.|.
plant  1225 LSEAEVLDVLEFRTQRRDLNFFIFRKKYSVQCPSPTACEEELHKRIFARMSAKNPEPNCVQVQVF 1289

  Fly  1181 TPVFDGRLMSALIDKRVGNLIME 1203
            .|..|...|.||| |..|.|..|
plant  1290 EPKEDNYFMRALI-KFDGRLHFE 1311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 33/169 (20%)
ANKYR <398..>460 CDD:440430 8/61 (13%)
ANK repeat 406..438 CDD:293786 5/31 (16%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 20/129 (16%)
HA2 687..789 CDD:461295 22/123 (18%)
OB_NTP_bind 862..945 CDD:400182 19/89 (21%)
AT5G10370NP_196599.2 HrpA 304..>756 CDD:441249 109/641 (17%)
OB_NTP_bind 860..937 CDD:400182 18/86 (21%)
RING_Ubox 1561..>1591 CDD:473075
BRcat_RBR 1646..1699 CDD:438996
Rcat_RBR_DEAH12-like 1718..1768 CDD:439036
Blue background indicates that the domain is not in the aligned region.

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