DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and AT3G62310

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_191790.1 Gene:AT3G62310 / 825404 AraportID:AT3G62310 Length:726 Species:Arabidopsis thaliana


Alignment Length:900 Identity:153/900 - (17%)
Similarity:288/900 - (32%) Gaps:327/900 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 DEILQSLYASRVIVYNAALCWDKSVFLPLVILD----DCRNKKSNVKIMCIERQAILATYNSQRT 215
            :|.|::|..::.::........|:..:|..::|    :..:|:....:.|.:.:.:.|...|:|.
plant    68 EEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKWLVGCTQPRRVAAMSVSRRV 132

  Fly   216 ANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLR-SLTSQQFRNISHLVVNDVHLHDPYTD 279
            |......:||.||..:.:....|..|.:.|.|....|| ::..........:::::.|.....||
plant   133 AEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATD 197

  Fly   280 ILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALA 344
            :|...::..|.:..:|::|::|.....:||.|:|..            ||.:.....||..    
plant   198 VLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG------------APLMKVPGRLHPV---- 246

  Fly   345 GIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGK 409
                         |.|....|..:.:            :||:|                      
plant   247 -------------EIFYTQEPERDYL------------EAAIR---------------------- 264

  Fly   410 TAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVVKSAK 474
            |.|..                                       |.|                  
plant   265 TVVQI---------------------------------------HMC------------------ 272

  Fly   475 PDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIV----KLNYMILSHCLTGSLQE- 534
                              :|        ||:||:.|.....|.    |:|..:      |:|.: 
plant   273 ------------------EP--------PGDILVFLTGEEEIEDACRKINKEV------GNLGDQ 305

  Fly   535 ---CSIFLLYDNMRNDYLQALVNASDETV--------KVVLATDIIESLCLKVPFKYQIDTACRL 588
               ..:..||..:.....|.:.:.:.|.|        |:|::|:|.|:........|.||.....
plant   306 VGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAK 370

  Fly   589 NNVYDTTSCSGDDRFEWVAKDALLRRELIL-------------------QPNKGDVQCFRLISKE 634
            ..||:..                :|.|.:|                   :|.|    ||||.:::
plant   371 QKVYNPR----------------IRVESLLVSPISKASAHQRSGRAGRTRPGK----CFRLYTEK 415

  Fly   635 AY-EELSETSQPSLQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVL 697
            :: .:|...:.|.:....|....|.:|.|..:.::. :::    .||....:..|::.|..:..|
plant   416 SFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFM----DPPAPETLMRALEVLNYLGAL 476

  Fly   698 DDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDR 762
            ||..::|..|..:.:.|:..|:.:|||......|.:.||::.:.||            :.|.:.|
plant   477 DDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLS------------VPNCFIR 529

  Fly   763 FTIYIQNSIKKERTYLSDN---QF----SDHFIFVRLYKEWQNRMHNRTPPLYLKDEYE-FMLNG 819
                     .:|....:|.   :|    .||...:.:|..::   .|...|.:.   || |:.|.
plant   530 ---------PREAQKAADEAKARFGHIEGDHLTLLNVYHAFK---QNNEDPNWC---YENFINNR 579

  Fly   820 LMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHM-VKAALTGGMYPNIYAVDTRKSS 883
            .|:...::|.::|.       |.||..|.|.:.:..|.:::: ::.|:..|.:..:..::.....
plant   580 AMKSADNVRQQLVR-------IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHY 637

  Fly   884 LKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQKSHIVYATLVVPLAVAMFSGHPRI 948
            |....:..|.:||:..|            ..:..|::.|                          
plant   638 LTVKDNQVVHLHPSNCL------------DHKPEWVIYN-------------------------- 664

  Fly   949 RLSPICDSEMSLTDRN-VNVFID---EWIWMVMSKATAEMVMRTRYYFFKMYHDL 999
                    |..||.|| :....|   ||:..|.|.                |:||
plant   665 --------EYVLTSRNFIRTVTDIRGEWLVDVASH----------------YYDL 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 33/163 (20%)
ANKYR <398..>460 CDD:440430 4/61 (7%)
ANK repeat 406..438 CDD:293786 2/31 (6%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 26/144 (18%)
HA2 687..789 CDD:461295 24/108 (22%)
OB_NTP_bind 862..945 CDD:400182 9/82 (11%)
AT3G62310NP_191790.1 HrpA 61..>691 CDD:441249 149/878 (17%)

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