DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and HVT1

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_850154.2 Gene:HVT1 / 817631 AraportID:AT2G30800 Length:1299 Species:Arabidopsis thaliana


Alignment Length:1305 Identity:273/1305 - (20%)
Similarity:499/1305 - (38%) Gaps:332/1305 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FRTSEHEAF------ANN--------ARSLGLRSQVV--------------HVNGN--------- 58
            ||.|.:|.:      :||        .|.:|::|:..              |.|||         
plant    32 FRASGNEVYTFEHNLSNNERGVIHQMCRKMGIQSKSSGRGEQRRLSIFKSRHKNGNKNEANEKSN 96

  Fly    59 ----SCVK-------VYKQACRHYLEEPKTLVLSSGATLNMFTLLS--------------RKSLM 98
                .||.       :.::...||   |.   .........||..|              ||..:
plant    97 KEKLKCVSFPPGADVILQELFTHY---PP---CDGDTAATSFTKYSGNKGKQGQWKDDFFRKPQI 155

  Fly    99 GKED-LELYADLVS-MKANAS--DLPSLHLPLPAIRPPNLRFWTEAQLNFLTAFLGHSLSDEILQ 159
            ..|: ||..|.|.| :|.:.:  ::..|...||                 :|:|     .|.|..
plant   156 SSEEILEKVASLSSRLKKDKALKEITKLRSKLP-----------------ITSF-----KDAITS 198

  Fly   160 SLYASRVIVYNAALCWDKSVFLPLVILDDC-RNKKSNVKIMCIERQAILATYNSQRTANFFGEQL 223
            ::.:::||:.:......|:..:|..:||.. .:|:...||:|.:.:.|.|...|:|.:...||.:
plant   199 AVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIVCTQPRRISAMSVSERISCERGESI 263

  Fly   224 GETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQ----QFRNISHLVVNDVHLHDPYTDILLSE 284
            ||.:|.::...|.....:.:::.|....||.|..:    ...:|:|::|:::|..|.|:|.:|:.
plant   264 GENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKGSVSSVSDITHIIVDEIHERDCYSDFMLAI 328

  Fly   285 IRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALAG---- 345
            ||..|.|:.:||::|:|...:.::|:.:|| |..:..:.......|..||.::.|.:...|    
plant   329 IRDLLPSNPHLRLILMSATLDAERFSGYFG-GCPVVRVPGFTYPVRTLYLEDVLSILKSGGDNHL 392

  Fly   346 --------IHKGPDIYKE----IPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLA 398
                    .|| .|:..|    :.||. .....|::.|..|......|:..     :|       
plant   393 SSTNLSISDHK-LDLTDEDKLALDEAI-ILAWTNDEFDALLDLVSSRGSHE-----IY------- 443

  Fly   399 PVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVL--- 460
              ||:|..|..|.:...:...:.:.:.:||..|||..:.......|:.||......|...::   
plant   444 --NYQHQSTWLTPLMVFAGKGRISDVCMLLSFGADWSLKSKDGMTALELAEAENQLEAAQIIREH 506

  Fly   461 --NSYS--------LHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYH 515
              ||.|        |..|:. :..|:.||..||..:|..:       .|:...|.||:.||.:..
plant   507 ADNSQSNSQQGQQLLDKYMA-TINPEQVDVSLIQQLMRKI-------CGDSEDGAILVFLPGWDD 563

  Fly   516 IVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETV----------KVVLATDIIE 570
            |.|....:|.:.......:..|..|:         ::|.|.::..          |:||||:|.|
plant   564 INKTRQRLLENPFFADSAKFDIICLH---------SMVPAGEQKKVFNRPPPGCRKIVLATNIAE 619

  Fly   571 SLCLKVPFKYQIDTACRLNNVYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQ---CFRLIS 632
            |........|.||:.......||..:.....:..||:|....:|    |...|..|   |:.|.|
plant   620 SAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQR----QGRAGRCQPGICYHLYS 680

  Fly   633 KEAYEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVL 697
            :.....:.:...|.::.|.::::||.||:|.||...:::|...:.||...::.:|:..|:.|..|
plant   681 RLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGAL 745

  Fly   698 DDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDR 762
            ...|::|.||.:...:||...:.:||.|.:|:.||||.||:..:....:|..:|           
plant   746 TPQEELTELGEKFGHLPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMP----------- 799

  Fly   763 FTIYIQNSIKKERTYLSDNQF-------SDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGL 820
                 .:.:::::...:..:.       |||...|..::.|:| ...|........:| |:....
plant   800 -----MSPVERQKAAAAKLELASLCGGDSDHLAVVAAFECWKN-AKGRGLSAEFCSQY-FVSPSA 857

  Fly   821 MEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNIYAV-----DTR 880
            |:.|..:||::.|.|:...:|.:    .:::.:|.|.:..:::|.|..|:||.:..:     :.|
plant   858 MKMLDQMRSQLESELKRHGIIPN----DISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFGNNR 918

  Fly   881 KSSLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNR-----QKSHIVYATLVVPLAVA 940
            ::.:::|....|.:|  ::..:|    |:|::.:....:|.:.     ...||...|:...|.:.
plant   919 RTIVETASGAKVRVH--SLSNNF----NLSSKKYDESLLVFDEITRGDGGMHIRNCTVARDLPLL 977

  Fly   941 MFSGHPRIRLSPICDSE--------------------------------------------MSLT 961
            :.|  ..|.::|...|:                                            ||..
plant   978 LIS--TEIAVAPTGSSDSDDSNEEEEDDEEVAANTNEEVAANTNEEGMDIHKEESRRGAKMMSSP 1040

  Fly   962 DRNVNVFIDEWI-WMVMSKATAEM-VMRTRY---YFFKMYHDLLKHCSELDMWRRDCEP---VSQ 1018
            :.:|.:.:|.|: :...:...|:| ::|.|.   ..||:.|.           |....|   .|.
plant  1041 ENSVKLVVDRWLPFRTTALEVAQMYILRERLMASILFKVTHP-----------REHLPPHLGASM 1094

  Fly  1019 YTVLTDTLSKIFESEDGFVGFFKPPPITFLPTPQLPSLYLLS---------VNAHFSWAREVEEN 1074
            :.:..      ..|.||..| ...||.:.:|......:|...         :|:.| |:..::||
plant  1095 HAIAG------ILSYDGHAG-LSCPPESMVPKHSRTEMYDTGGWEEKPNSFLNSLF-WSLSLKEN 1151

  Fly  1075 M------LSKPHHFN-----SHFIERQFFVLYAGGDCEEFHSRNTPAFIESVLGK-----FVRPI 1123
            .      .::.|::|     :..|.||          :.:..||..|...:..||     ||.|.
plant  1152 KHPSHTNRNQQHNYNMAPTEAASIPRQ----------QNYKQRNPKATNNTDSGKKKEKMFVNPT 1206

  Fly  1124 DTPNR 1128
            :..|:
plant  1207 NRINQ 1211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 7/31 (23%)
ANK 407..>460 CDD:238125 11/52 (21%)
Ank_2 413..>460 CDD:289560 9/46 (20%)
HrpA <484..973 CDD:224557 114/562 (20%)
HA2 694..763 CDD:214852 20/68 (29%)
OB_NTP_bind 823..945 CDD:285018 26/131 (20%)
HVT1NP_850154.2 R3H_DEXH_helicase 22..80 CDD:100077 9/47 (19%)
HrpA 153..>946 CDD:224557 199/880 (23%)
ANK repeat 417..444 CDD:293786 6/41 (15%)
ANK repeat 446..481 CDD:293786 8/34 (24%)
PTZ00322 453..>506 CDD:140343 10/52 (19%)
ANK repeat 483..507 CDD:293786 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106429
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.670

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