DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and tdrd9

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_012824154.2 Gene:tdrd9 / 780352 XenbaseID:XB-GENE-5893104 Length:1346 Species:Xenopus tropicalis


Alignment Length:1252 Identity:243/1252 - (19%)
Similarity:420/1252 - (33%) Gaps:413/1252 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PCTFRTSEHEAFANNARSLGLRSQVVHVNGNSCVKVYKQACRHYLEEPKTLVLSSGATLNMFTLL 92
            |.:..|...||..:..|..||:|:      |:.||.::......||:.|:...::..|..:.|. 
 Frog    32 PSSVATGGREAEESERRYRGLQSE------NAYVKEFRLVEERELEKYKSCSANTARTRKISTF- 89

  Fly    93 SRKSLMGKEDLELYADLVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFLTAFLGHSLSDEI 157
                           |.::|.......|.    ||.::.                      .:|:
 Frog    90 ---------------DALTMPEFDPKYPE----LPILKS----------------------REEL 113

  Fly   158 LQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAI----LATYNSQRTANF 218
            :..:..:.|:|.:.|....||..||..|||..|.......|:..:.:.|    :||:.|.:....
 Frog   114 IALIENNSVVVIHGATGSGKSTQLPQFILDYLRQHGQYCNIVVTQPRKIAARSIATWISNQRCWT 178

  Fly   219 FGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTS-QQFRNISHLVVNDVHLHDPYTDILL 282
            .|.::|..||::    ...|..|.:||.|....|:.:.| :.....:|:.:::||......|.||
 Frog   179 LGGRVGYQVGLE----KVASEETQLIYMTTGVLLQKIVSAKSLLEFTHIFIDEVHERTEEMDFLL 239

  Fly   283 SEIRMALSSHQN-LRVVLLSQMGNPKKFTDFFGEGLQLNM----IKQPEVAP---RVSYLNELHS 339
            ..:|..|.::.. ::|:|:|...|.|:|.|:|...:...|    |.:.|..|   .|.||::|  
 Frog   240 MVVRKLLCTNSRFVKVILMSATINCKEFADYFAVPVLNKMTPAYIFEVEGKPHDIEVFYLDDL-- 302

  Fly   340 CIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRH 404
                          |:||:|                                             
 Frog   303 --------------KDIPQA--------------------------------------------- 308

  Fly   405 SLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYV 469
                |.|.|::.|                |.|.....:.|.||                 :|   
 Frog   309 ----KIAAHYSDE----------------PLISKEMYEVATSL-----------------IH--- 333

  Fly   470 VKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYS------PGNILIILPTYYHIVKLNYMILSHCL 528
                         :.|.|    .|.|...|:.|      ..::|:.||   .::::|||  ....
 Frog   334 -------------LFDEM----EKEELKKGKMSHKAYIESNSVLVFLP---GLMEINYM--HELF 376

  Fly   529 TGSLQE-CSIFLLYDNMRND-----YLQALVNASDETVKVVLATDIIESLCLKVPFKYQIDTACR 587
            |..:|: ..::.|:.::..|     ::..::...    ||:|:|:|.||.......||.||....
 Frog   377 TNMVQKRLHVYPLHSSITLDEQNLVFMPPVIGYR----KVILSTNIAESSITVPDVKYVIDFCLT 437

  Fly   588 LNNVYDTTSCSGDDRFEWVAK-DALLRRELILQPNKGDVQCFRLISKEAYEE-LSETSQPSLQTM 650
            ...|.|..:.....|..|.:| :...|:....:.:||  .|:|.:.|:.::. :.|...|.:...
 Frog   438 KTLVCDEETNYQSLRLSWASKTNCDQRKGRAGRVSKG--YCYRFVQKDFWKNIIPENVIPEMLRS 500

  Fly   651 QLDKICLAVKLL---SPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLD-----------DAE 701
            .|....|.||||   .|..:    |...:|||.:.::...:..||::..|.           |.|
 Frog   501 PLGSTILKVKLLDMGEPRAL----LATALSPPNITDIERTILLLKELGALAVSGKRENENPYDGE 561

  Fly   702 DVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIY 766
             :|:||..|..:||..|||::::.|.:..||:..:.|.::||..:...:||...:|..       
 Frog   562 -LTFLGKVLAQLPVDLQLGKLIVLGHVFGCLEECIIIAAALSLKNFFAMPFRHLLDGY------- 618

  Fly   767 IQNSIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLTSIRSEI 831
                  :.:...|.:..||....|..:|.||: ...|......|||.|:......:         
 Frog   619 ------RSKLSFSGSSRSDCIALVDAFKSWQS-CKERGELRLSKDELEWGKRNYFQ--------- 667

  Fly   832 VSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAA----------------LTGGMYPNIYAVDTR 880
            :..:|....::...|..:::.|.     |:.:.|                :.|..|||.:...  
 Frog   668 IKRIREVAALYDDLKKRISHFNM-----HVTQPARDPDYNFKQRFILQIVMAGAFYPNYFTFG-- 725

  Fly   881 KSSLKSAFSGNVSMHPNT--VLRDFLEPLNISAQSF------RTPWIVCNRQKSHI--------- 928
            :|..:||.....:..|.|  ||:      |:...||      ::.:..|.:.||.:         
 Frog   726 QSDERSAVRDLSAKDPRTTVVLK------NVPNYSFLYYKQIQSLFRQCGQVKSILFDGSRAFVE 784

  Fly   929 --------------VY-----ATLVVPLAVAMFSGHPRIRLSPICDSEMSLTDRNVNVFIDEWIW 974
                          ||     |.|.:||   :.:.||...:....|:..||....:||       
 Frog   785 FSRNPTERFKTLTAVYLALKMAQLKIPL---ILNVHPTEDIEKADDTITSLKLSRINV------- 839

  Fly   975 MVMSKATAEMVMRTRYYFFKMYHDLLKHCSELDMWRRDCEPVSQYTV-LTDTLSKIFESEDGFVG 1038
                                                 ||:..:..:| :..|:.|..|:.||.. 
 Frog   840 -------------------------------------DCQTQTFESVHVAKTMEKHLETLDGLT- 866

  Fly  1039 FFKPPPITFLPTPQLPSLYLLSVN-------AHFSWAREVEENMLSKPHHFNSHFIERQFFVLYA 1096
                                ||||       .|| |...::...::......::..::|...|  
 Frog   867 --------------------LSVNITEVVEVGHF-WGFSIDTKSMAILEELATNIRQQQLVPL-- 908

  Fly  1097 GGDCEEFHSRN------TPAFIESVLGKFVRPIDTPNRHIFVILYRKDPDMMLSISRAKFVNGVF 1155
               .|..||..      |....||.....:..|......:|.:.|.....:.|::.|        
 Frog   909 ---TERPHSNMMCLAPFTNKDSESYYRAQILYISGSTAMVFFVDYGNKSQVELTLLR-------- 962

  Fly  1156 MLQEYFRNNIPVFEILD 1172
            |:.|... ||| |:.|:
 Frog   963 MIHETIL-NIP-FQALE 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 6/31 (19%)
ANK 407..>460 CDD:238125 9/52 (17%)
Ank_2 413..>460 CDD:289560 7/46 (15%)
HrpA <484..973 CDD:224557 121/568 (21%)
HA2 694..763 CDD:214852 21/79 (27%)
OB_NTP_bind 823..945 CDD:285018 28/173 (16%)
tdrd9XP_012824154.2 HrpA 60..>677 CDD:224557 164/819 (20%)
Tudor_TDRD9 872..972 CDD:410502 19/114 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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