DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and dhx38

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_002937626.2 Gene:dhx38 / 734019 XenbaseID:XB-GENE-990308 Length:1212 Species:Xenopus tropicalis


Alignment Length:726 Identity:135/726 - (18%)
Similarity:242/726 - (33%) Gaps:240/726 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 IMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRS-LTSQQFR 261
            |.|.:.:.:.|...::|.:......|||.||..:.:....|..|.|.|.|....||. |......
 Frog   565 IACTQPRRVAAMSVAKRVSEEMQVSLGEEVGYAIRFEDCTSEKTLIKYMTDGILLRECLREADLD 629

  Fly   262 NISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPE 326
            :.|.:::::.|.....||:|...:|..::...:|::::.|...:..||..|||.           
 Frog   630 HYSAVIMDEAHERSLNTDVLFGLLREVVTRRSDLKLIVTSATMDADKFATFFGN----------- 683

  Fly   327 VAPRVSYLNELHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLY 391
                                                                             
 Frog   684 ----------------------------------------------------------------- 683

  Fly   392 AVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHEC 456
                  .|:.|   :.|:|..                                            
 Frog   684 ------VPIFY---IPGRTFP-------------------------------------------- 695

  Fly   457 IDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNY 521
            :|:|.|        |:.:.|:|:..:...:...|         ..:.|:|||.:|....|     
 Frog   696 VDILFS--------KTPQEDYVEAAVKQALQIHL---------SGAAGDILIFMPGQEDI----- 738

  Fly   522 MILSHCLTGSLQE------CSIFLLYDNMRNDYLQALV--NASDETVKVVLATDIIESLCLKVPF 578
            .:.|..:...|:|      .::..:|..:.:| |||.:  .|.|...|.::||:|.|:.......
 Frog   739 EVTSDQIVERLEELDSAPPLAVLPIYSQLPSD-LQAKIFQKAPDGVRKCIVATNIAETSLTVDGI 802

  Fly   579 KYQIDTA-CRLN-----------NVYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQCFRLI 631
            .:.||:. |:|.           .:|..:..:.:.|.....:             .|..||:||.
 Frog   803 MFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR-------------TGPGQCYRLY 854

  Fly   632 SKEAYE-ELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKID 695
            ::.||: ||..|:.|.:|...|..:.|.:|.|....::..:.   :.|||..|:.:::..|..:.
 Frog   855 TQSAYKNELLHTTVPEIQRTNLSNVVLLLKSLGVQDLLLFHF---MDPPPEDNMLNSMYQLWILG 916

  Fly   696 VLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTA----DPLGIPFTEDI 756
            .||:...:|..|..:::.|:...|.:|||....:.|...||.:||.||..    .|.|  ..|:.
 Frog   917 ALDNTGALTPTGRLMVEFPLDPALSKMLIVSCDMGCSSEILIVVSMLSVPAIFYRPKG--REEES 979

  Fly   757 DNLWDRFTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHN-----------------RT 804
            |.:.::|.:                ..|||..::.::.:|:|..::                 |.
 Frog   980 DQVREKFAV----------------PESDHLTYLNVFLQWKNNNYSSGWCNQHFIHAKAMRKVRE 1028

  Fly   805 PPLYLKDEYEFMLNGLMEQLTSIRS--EIVSSLRAANLIHSRGKLS-----MNNLNQMSCNWHMV 862
            ....|||   .|::..| .|:|..|  :||.....|...|...:|.     :|....|.|:.|..
 Frog  1029 VRAQLKD---IMVSQRM-SLSSCGSDWDIVRKCICAAYFHQAARLKGIGEYVNVRTGMPCHLHPT 1089

  Fly   863 KAALTGGMYPN 873
            .:....|..|:
 Frog  1090 SSLFGMGYTPD 1100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 2/31 (6%)
ANK 407..>460 CDD:238125 3/52 (6%)
Ank_2 413..>460 CDD:289560 1/46 (2%)
HrpA <484..973 CDD:224557 95/439 (22%)
HA2 694..763 CDD:214852 20/72 (28%)
OB_NTP_bind 823..945 CDD:285018 14/58 (24%)
dhx38XP_002937626.2 HrpA 483..1131 CDD:224557 135/726 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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