DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and Dhx40

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_080467.3 Gene:Dhx40 / 67487 MGIID:1914737 Length:779 Species:Mus musculus


Alignment Length:772 Identity:151/772 - (19%)
Similarity:252/772 - (32%) Gaps:245/772 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRS-LTSQQFRNISHLVVNDVHLHD 275
            :||.|......||..||.|:.:....|..|.|.|.|....|:. |........|.:::::.|...
Mouse   115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERT 179

  Fly   276 PYTDILLSEIRMAL-----SSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLN 335
            ..||||...::...     :..::|:||::|......|.:.|||                     
Mouse   180 LTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG--------------------- 223

  Fly   336 ELHSCIALAGIHKGPDIYKEIPEAF-RANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAP 399
               :|    .|...|.....:.|.| ....||:.:....:||..::..|..|......:..    
Mouse   224 ---NC----PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILV---- 277

  Fly   400 VNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYS 464
                 .|||:..:..:.||                    |||.                      
Mouse   278 -----FLTGQFEIEKSCEL--------------------LFQM---------------------- 295

  Fly   465 LHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLT 529
                      .:.||||..:....|               :.|:|||.|                
Mouse   296 ----------AESVDYDYDVQDTTL---------------DGLLILPCY---------------- 319

  Fly   530 GSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKVPFKYQIDTAC--RLNNVY 592
            ||:..       |..|..:|.......    |.|::|:|..:.......:|.:|...  :||:  
Mouse   320 GSMTT-------DQQRRIFLPPPPGIR----KCVISTNISATSLTIDGIRYVVDGGFVKQLNH-- 371

  Fly   593 DTTSCSGDDRFEWV---AKDALLRRELILQPNKGDVQCFRLISKEAYEE-LSETSQPSLQTMQLD 653
              ....|.|..|.|   ..:||.|.....:...|  :|||:.|||.:.: :.:...|.::...|.
Mouse   372 --NPRLGLDILEVVPISKSEALQRSGRAGRTASG--KCFRIYSKEFWSQCMPDHVIPEIKRTSLT 432

  Fly   654 KICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSC 717
            .:.|.:|.|:.:.:|. .||    .||....:..|::.|.:.|.:|.:..||.||..:::.|:..
Mouse   433 SVVLTLKCLAIHDVIRFPYL----DPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPP 493

  Fly   718 QLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQNSIKKERTYLSDNQ 782
            .|...:|....|.|.|.:|.|.:.||                       ::|             
Mouse   494 HLTCAVIRAASLDCEDLLLPIAAMLS-----------------------VEN------------- 522

  Fly   783 FSDHFIFVR-LYKEWQNRMHNRTPPLYLK----DEYEFMLNGLMEQLTSIRSEIVSSLRAANLIH 842
                 :|:| :..|:|.....|...|..|    :::. .|..:.||..|  |...:|....:.||
Mouse   523 -----VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFA-TLAVIFEQCKS--SGAPASWCQKHWIH 579

  Fly   843 SRGKLS-----------MNNLNQMS---------CNWHMVKAALTGGMYPNIYAVDTRKSSLKSA 887
            .|...|           :..|.|.|         ....:::..|..|.:.|:     .:.|:...
Mouse   580 WRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNV-----ARRSVGRT 639

  Fly   888 F------SGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNR-QKSHIVYATLVVPL 937
            |      ...|.:||::.|.:         |..:..||:.:. ..:..|||.:|.|:
Mouse   640 FCTMDGRGSPVHIHPSSALHE---------QETKLEWIIFHEVLVTTKVYARIVCPI 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 5/31 (16%)
ANK 407..>460 CDD:238125 7/52 (13%)
Ank_2 413..>460 CDD:289560 5/46 (11%)
HrpA <484..973 CDD:224557 99/493 (20%)
HA2 694..763 CDD:214852 16/68 (24%)
OB_NTP_bind 823..945 CDD:285018 28/142 (20%)
Dhx40NP_080467.3 OB_NTP_bind 591..699 CDD:285018 20/111 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53
DEXDc 48..236 CDD:214692 32/148 (22%)
DEXDc 78..213 CDD:238005 25/97 (26%)
DEAH box 173..176 0/2 (0%)
HELICc 312..399 CDD:197757 25/117 (21%)
HA2 469..557 CDD:214852 24/129 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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