DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and Dhx40

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_080467.3 Gene:Dhx40 / 67487 MGIID:1914737 Length:779 Species:Mus musculus


Alignment Length:772 Identity:151/772 - (19%)
Similarity:252/772 - (32%) Gaps:245/772 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRS-LTSQQFRNISHLVVNDVHLHD 275
            :||.|......||..||.|:.:....|..|.|.|.|....|:. |........|.:::::.|...
Mouse   115 AQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVIILDEAHERT 179

  Fly   276 PYTDILLSEIRMAL-----SSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLN 335
            ..||||...::...     :..::|:||::|......|.:.|||                     
Mouse   180 LTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFG--------------------- 223

  Fly   336 ELHSCIALAGIHKGPDIYKEIPEAF-RANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAP 399
               :|    .|...|.....:.|.| ....||:.:....:||..::..|..|......:..    
Mouse   224 ---NC----PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILV---- 277

  Fly   400 VNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYS 464
                 .|||:..:..:.||                    |||.                      
Mouse   278 -----FLTGQFEIEKSCEL--------------------LFQM---------------------- 295

  Fly   465 LHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLT 529
                      .:.||||..:....|               :.|:|||.|                
Mouse   296 ----------AESVDYDYDVQDTTL---------------DGLLILPCY---------------- 319

  Fly   530 GSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKVPFKYQIDTAC--RLNNVY 592
            ||:..       |..|..:|.......    |.|::|:|..:.......:|.:|...  :||:  
Mouse   320 GSMTT-------DQQRRIFLPPPPGIR----KCVISTNISATSLTIDGIRYVVDGGFVKQLNH-- 371

  Fly   593 DTTSCSGDDRFEWV---AKDALLRRELILQPNKGDVQCFRLISKEAYEE-LSETSQPSLQTMQLD 653
              ....|.|..|.|   ..:||.|.....:...|  :|||:.|||.:.: :.:...|.::...|.
Mouse   372 --NPRLGLDILEVVPISKSEALQRSGRAGRTASG--KCFRIYSKEFWSQCMPDHVIPEIKRTSLT 432

  Fly   654 KICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSC 717
            .:.|.:|.|:.:.:|. .||    .||....:..|::.|.:.|.:|.:..||.||..:::.|:..
Mouse   433 SVVLTLKCLAIHDVIRFPYL----DPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPP 493

  Fly   718 QLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQNSIKKERTYLSDNQ 782
            .|...:|....|.|.|.:|.|.:.||                       ::|             
Mouse   494 HLTCAVIRAASLDCEDLLLPIAAMLS-----------------------VEN------------- 522

  Fly   783 FSDHFIFVR-LYKEWQNRMHNRTPPLYLK----DEYEFMLNGLMEQLTSIRSEIVSSLRAANLIH 842
                 :|:| :..|:|.....|...|..|    :::. .|..:.||..|  |...:|....:.||
Mouse   523 -----VFIRPVDPEYQKEAEQRHRELAAKAGGFNDFA-TLAVIFEQCKS--SGAPASWCQKHWIH 579

  Fly   843 SRGKLS-----------MNNLNQMS---------CNWHMVKAALTGGMYPNIYAVDTRKSSLKSA 887
            .|...|           :..|.|.|         ....:::..|..|.:.|:     .:.|:...
Mouse   580 WRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNV-----ARRSVGRT 639

  Fly   888 F------SGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNR-QKSHIVYATLVVPL 937
            |      ...|.:||::.|.:         |..:..||:.:. ..:..|||.:|.|:
Mouse   640 FCTMDGRGSPVHIHPSSALHE---------QETKLEWIIFHEVLVTTKVYARIVCPI 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 27/107 (25%)
ANKYR <398..>460 CDD:440430 8/61 (13%)
ANK repeat 406..438 CDD:293786 5/31 (16%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 23/130 (18%)
HA2 687..789 CDD:461295 19/101 (19%)
OB_NTP_bind 862..945 CDD:400182 17/83 (20%)
Dhx40NP_080467.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..53
HrpA 51..>699 CDD:441249 151/772 (20%)
DEAH box 173..176 0/2 (0%)
Blue background indicates that the domain is not in the aligned region.

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