DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and dhx30

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_021322211.1 Gene:dhx30 / 570735 ZFINID:ZDB-GENE-130530-833 Length:1173 Species:Danio rerio


Alignment Length:1112 Identity:237/1112 - (21%)
Similarity:410/1112 - (36%) Gaps:321/1112 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PCTFRTSEH---EAFANNA-------RSLGLRSQ----VVHVNGN-----SCVKVYKQACR---- 69
            |.||..|..   ||.||.|       :.|.|..:    :.|...:     ...:.::|.||    
Zfish   244 PMTFTASGRRRLEAEANAAALACLKLKELNLLDEQNKPLTHARYHQDQVREAGERHRQPCRMQIP 308

  Fly    70 --------HYL---------------EEPKTLVLSSGA--------TLNMFTLLSRKSLMGKEDL 103
                    .||               ||.::..:|:.|        ..:..|....::|..||..
Zfish   309 EQLELRIQQYLSQYPVEAEVQKLWDEEEHQSSSISTAADDYDEDEFITDAITSKPYRALEPKEAE 373

  Fly   104 ELYADLVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFLTAFLGHSLSDEILQSLYASRVIV 168
            .|...|:||...........||:.|.:                        :.||:::.:|:|:|
Zfish   374 HLSQRLLSMWKRVGPARGAELPVDAHK------------------------ESILEAVRSSQVVV 414

  Fly   169 YNAALCWDKSVFLPLVILDD--CRNKKSNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQL 231
            .:......|:..:|..:|:|  .|.:.:...::..:.:.|.|...:||.|:..|..|...||.|:
Zfish   415 ISGETGCGKTTRIPRFLLEDGVLRGEGAECNVLVTQPRRISAVSVAQRVAHEIGPALQHCVGYQV 479

  Fly   232 PYFS--AVSSSTFIIYSTAQYFLRSLTSQ-QFRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQ 293
            ...|  ...|...:::.|....|:.|.|. :...|||::|::||..|..||:||..:|..||...
Zfish   480 RLESRPPERSGGALLFLTLGVLLKKLQSNPRLEGISHVIVDEVHERDVQTDLLLHLLRCVLSLRP 544

  Fly   294 NLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALAGIHKGPDIYKEIP- 357
            .|:|:|:|..|:.::...:||                        .|..|           .:| 
Zfish   545 ELKVLLMSASGDSQRLAQYFG------------------------GCPVL-----------RVPG 574

  Fly   358 --EAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNK 420
              ...||....:.|:|             :.||.|     |:....:...:.|:           
Zfish   575 FMHPVRARFLEDMQLD-------------SRRPLL-----DMGSTQWSAEVRGR----------- 610

  Fly   421 ANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVVKSAKPDFVDYDLIID 485
                     ||.        ::|.::                            ||.   ||:.|
Zfish   611 ---------MGK--------EENNVT----------------------------PDL---DLVAD 627

  Fly   486 IM-YLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYL 549
            :: ::.||      ||  ||.:|..||.:..|..:...:.......|..:. |..|:.:|.    
Zfish   628 VIDHIHRT------GE--PGAVLCFLPGWQEIKAVQQQLEEKQAYRSGSQI-ILPLHSSMA---- 679

  Fly   550 QALVNASDETV----------KVVLATDIIESLCLKVPFKYQIDTACRLNNVYDTTSCSGDDRFE 604
                 .|::.|          |:||||:|.|:........:.:|...:....||..:........
Zfish   680 -----VSEQQVVFQRPPAGQRKIVLATNIAETSITIDDIVHVVDAGVQKEQNYDPRTKVSALNTV 739

  Fly   605 WVAKDALLRRELILQPNKGDVQ---CFRLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSPNT 666
            |:::..:.:|    :...|..|   .:.|..::..|.:.....|.:....|:.:.:..|:..|.:
Zfish   740 WISQANVTQR----RGRAGRCQPGHSYHLFPRKQLERMEPFPVPEILRTPLESVVMQAKIHCPES 800

  Fly   667 IISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRC 731
            ...::|...:..|....|..||:.|..|.|||.:||:|.||..:..:....:||::|:|..|..|
Zfish   801 KAEDFLSQVLDSPDTQAVRTAVKNLMDIGVLDASEDLTPLGHHVSCMSCDPRLGKVLVFSALFSC 865

  Fly   732 LDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEW 796
            :.|:|::|:.| |.|    ||...:.|         :..:.|.:..||.:..||:.:|.|:.:.|
Zfish   866 VQPVLSVVACL-TRD----PFYNSLQN---------RTLVSKAKAELSGSSGSDYLVFSRVVQSW 916

  Fly   797 QNRMHNRTPPLYLKDEYEF------MLNGLMEQLTSIRSEIVSSLRAANLI-HSRGKLSMNN-LN 853
            :.: |:|.......|::..      .::|||:|.:       .:|..|.|: ||...|.::: :|
Zfish   917 REQ-HSRDSRQDYLDKHTLSGASLRFIHGLMQQFS-------DNLCEAGLVDHSAECLRLSSPVN 973

  Fly   854 QMSCNWHMVKAALTGGMYPNIYAVD----TRKSSLKS---AF---SGNVSMHPNTVLRD------ 902
            |.|....::.|.|..|:|||:..|.    |:....::   :|   ||.|.:|.::|.||      
Zfish   974 QQSKEEQLITAVLLAGLYPNLIQVKKGVVTKSGRFRAENVSFRTESGPVLLHRSSVNRDKQHLWS 1038

  Fly   903 ----FLEPLNISAQSFRTPWIVCNRQKSHIVYATLVVPLAVAMFSGHPRIRLSPICD-SEMSLTD 962
                |...:..|.|.|             |..:|:|.|||:.:.:.         || ||..:.|
Zfish  1039 RWLTFFSAVKSSGQVF-------------IRDSTVVHPLALLLLTD---------CDLSERVVGD 1081

  Fly   963 RNVNVFID-----EWIWMVMSKATAEMVMRTRYYFFKMYHDLLK--HCSELDMWRRDCEPVSQYT 1020
            | |.|.:.     .|   ..|.|..|::...|.....|.:..|:  .|......|:|.|.:.   
Zfish  1082 R-VEVALPGPALIRW---EFSPAVWELLWDLRASIQAMIYRKLRQSECKSSSEQRKDSELID--- 1139

  Fly  1021 VLTDTLS 1027
            :|.|.|:
Zfish  1140 LLVDLLN 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 3/31 (10%)
ANK 407..>460 CDD:238125 4/52 (8%)
Ank_2 413..>460 CDD:289560 3/46 (7%)
HrpA <484..973 CDD:224557 125/536 (23%)
HA2 694..763 CDD:214852 24/68 (35%)
OB_NTP_bind 823..945 CDD:285018 36/143 (25%)
dhx30XP_021322211.1 HrpA 371..>929 CDD:224557 151/730 (21%)
OB_NTP_bind 947..1069 CDD:311586 36/141 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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