DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and dhx40

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_021322026.1 Gene:dhx40 / 570225 ZFINID:ZDB-GENE-080507-1 Length:734 Species:Danio rerio


Alignment Length:834 Identity:153/834 - (18%)
Similarity:286/834 - (34%) Gaps:249/834 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 HSLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCIERQAILATYNSQRT 215
            :...|:::|::..:..::........|:..||..:.....::...:.:....|.|.:..  :||.
Zfish    21 YQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNGRIGVTQPRRVAAITV--AQRV 83

  Fly   216 ANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRS-LTSQQFRNISHLVVNDVHLHDPYTD 279
            ::....:|||.||.|:.:....:..|.|.|.|....||. |........|.:::::.|.....||
Zfish    84 SSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREILADPSLTQYSIVILDEAHERSLNTD 148

  Fly   280 ILLSEIRMAL--SSHQN---LRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHS 339
            :||..::..|  .|..|   |:||::|.....:|.:.|:|......:       |..:|..:...
Zfish   149 VLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTI-------PGRTYPVKETF 206

  Fly   340 CIALAGIHKGPDIY-KEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYR 403
            |..:....|...:| ||:                 ::...::.|:.|....|.            
Zfish   207 CNLIGPKDKESSVYVKEV-----------------VKMTLDVHTNEAAGDILV------------ 242

  Fly   404 HSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGY 468
             .|||:      ||:.||..|              ||:                           
Zfish   243 -FLTGQ------SEIEKACDL--------------LFE--------------------------- 259

  Fly   469 VVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLTGSLQ 533
                 |.:.:||              .|...:.|...:||:                        
Zfish   260 -----KAEILDY--------------RYDVHDRSVDGLLIL------------------------ 281

  Fly   534 ECSIFLLYDNMRNDYLQALVNASDETV-KVVLATDIIESLCLKVPFKYQIDTAC--RLNNVYDTT 595
                 .||.:|..|..:.:...:.:.| |.|:||:|..:.......:|.:|:..  :||:    .
Zfish   282 -----SLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNH----N 337

  Fly   596 SCSGDDRFEWVAKDALLRRELILQPNKGDVQ-------------CFRLISKEAYEE-LSETSQPS 646
            |..|.|..|            ::..:|.:.|             |||:.||:.::. :.|.:.|.
Zfish   338 SRVGLDILE------------VVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPE 390

  Fly   647 LQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRL 710
            :|...|..:.|.:|.|..:.:|. .||..    |....:..|::.|.:.|.:|...:||.||..:
Zfish   391 IQRTSLTSVILTLKCLGVHDVIRFPYLDC----PEERFILTALKQLYQYDAIDRRGEVTKLGRLM 451

  Fly   711 MDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYI-------- 767
            ::.|:...|.|.|:....|.|.|.:|.:.:.||            ::|      |:|        
Zfish   452 VEFPLPPNLTRALLKAAALGCEDIMLPVAAMLS------------VEN------IFIRPGKPEKQ 498

  Fly   768 -QNSIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEF--MLNGLMEQLTSIRS 829
             :..::.:.........:|   |:.|...::....:..|..:.|:.:..  .:.......|.:|.
Zfish   499 KEAEVRHKEIAACSGGSND---FLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLRE 560

  Fly   830 EIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNIYAVDTRKSSLKS-----AFS 889
            .::...:..:..|.|.:.|.:.|         ::..|..|.:.|:    .|:|..||     ...
Zfish   561 ILLRLKQQKDFPHERFEGSRSEL---------LRQCLCLGYFTNV----ARRSIGKSFCTMDGHG 612

  Fly   890 GNVSMHPNTVLRDFLEPLNISAQSFRTPWI------VCNRQKSHIVYATLVVPL 937
            .:|.:||::.|         ..|..:..||      |.:|     ||...|.|:
Zfish   613 SSVLIHPSSCL---------FGQELQLDWIIFHDVLVTSR-----VYVRTVCPI 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 37/164 (23%)
ANKYR <398..>460 CDD:440430 10/61 (16%)
ANK repeat 406..438 CDD:293786 8/31 (26%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 21/131 (16%)
HA2 687..789 CDD:461295 22/110 (20%)
OB_NTP_bind 862..945 CDD:400182 20/87 (23%)
dhx40XP_021322026.1 HrpA 18..>702 CDD:441249 153/834 (18%)

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