DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and dhx9

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001188373.1 Gene:dhx9 / 568043 ZFINID:ZDB-GENE-070912-171 Length:1270 Species:Danio rerio


Alignment Length:893 Identity:194/893 - (21%)
Similarity:336/893 - (37%) Gaps:226/893 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LRFWTEAQLNFLTAFLGHS------LSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDC--R 190
            |.:..|...|..|.....|      ..::|:.::|.:.|::...|....|:..:|..|||:.  .
Zfish   375 LNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKG 439

  Fly   191 NKKSNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAV-SSSTFIIYSTAQYFLRS 254
            .:.|:..|:..:.:.|.|...::|.:...||.:|::.|..:.:.|.: .....|::.|....||.
Zfish   440 GRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRK 504

  Fly   255 LTSQQFRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQL 319
            |.| ..|.|||::|:::|..|..||.||..:|..:.::.::||:|:|...:...|.::|   ...
Zfish   505 LES-GIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYF---FNC 565

  Fly   320 NMIKQPEVAPRVSYLNE--LHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGT 382
            .:|   ||..|...:.|  |..||.:......|                   ||:..:...:.|.
Zfish   566 PVI---EVHGRAHPVQEYFLEDCIQMTQFVPPP-------------------MDRKRKDKDDEGG 608

  Fly   383 DAALRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISL 447
            |.       .||.::. ....:|...|.|:   |:||:                           
Zfish   609 DE-------DVNCNVI-CGSEYSPETKRAM---SQLNE--------------------------- 635

  Fly   448 AAMNGNHECIDVLNSYSLHGYVVKSAKPDFV-DYDLIIDIMYLLRTKPEYSPGEYSPGNILIILP 511
              ...:.|.|:.|..| :....|..|...|: .::||..:...|...|.:...:|.      |||
Zfish   636 --KETSFELIEALLKY-IETLEVPGAVLVFLPGWNLIYSMQKHLEMNPHFGGHQYR------ILP 691

  Fly   512 TYYHIVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKV 576
            .:..|                           .|.:..:......|...||:|:|:|.|:.....
Zfish   692 LHSQI---------------------------PREEQRRVFEPVPDGVTKVILSTNIAETSITIN 729

  Fly   577 PFKYQIDTACRL--------NNV--YDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQ---CF 628
            ...:.:| :|:.        ||:  |.|.         |.:|..|.:|    :...|.|:   ||
Zfish   730 DVVFVLD-SCKQKVKLFTSHNNMTNYATV---------WASKTNLEQR----KGRAGRVRPGFCF 780

  Fly   629 RLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKK 693
            .|.|:..:|:|.....|.:....|.::.|::|||.... |..:|...|.||||..|..|...|::
Zfish   781 HLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGG-IGNFLSKAIEPPPLDAVIEAEHTLRE 844

  Fly   694 IDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDN 758
            :|.||..:::|.||..|..:|:..:||:|:|.|.:....|.:.||  |.:|..|  .||..:...
Zfish   845 LDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTI--SAATCFP--EPFISEGKR 905

  Fly   759 LWDRFTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEWQN-RM-----------HNR--TPPLYL 809
            |.     ::..:       .:.::||||...:.:::.|.. |:           |.|  .|.|.:
Zfish   906 LG-----FVHRN-------FAGSRFSDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRM 958

  Fly   810 KDEYEFMLNGLMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNI 874
            ..|.:..|..::..:......:::.:             .||:...: |..:|.:.||.|.|||:
Zfish   959 TWEAKVQLKEILVNVGFPEECLLNQV-------------FNNVGPDN-NLDLVISLLTFGSYPNV 1009

  Fly   875 -YAVDTR-------------KSSLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQK 925
             |..:.|             |||:...||.:...:|:        |..:..:..||..|..... 
Zfish  1010 CYHKEKRKILTTEGRNALIHKSSVNCPFSNHDLKYPS--------PFFVFGEKIRTRAISAKSM- 1065

  Fly   926 SHIVYATLVVPLAVAMFSGHPRIRLSPICDSEMSLTDRNVNVFIDEWI 973
                  |||.||.:.:|             ....:|.....|.:|:||
Zfish  1066 ------TLVSPLQLILF-------------GSKKITSNGEVVELDDWI 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 42/161 (26%)
ANKYR <398..>460 CDD:440430 8/61 (13%)
ANK repeat 406..438 CDD:293786 5/31 (16%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 25/139 (18%)
HA2 687..789 CDD:461295 28/101 (28%)
OB_NTP_bind 862..945 CDD:400182 25/96 (26%)
dhx9NP_001188373.1 DSRM_DHX9_rpt1 3..71 CDD:380683
DSRM_DHX9_rpt2 185..259 CDD:380684
DEXHc_DHX9 337..570 CDD:350730 49/201 (24%)
HrpA 387..>892 CDD:441249 141/621 (23%)
OB_NTP_bind 1000..1079 CDD:400182 24/106 (23%)
Blue background indicates that the domain is not in the aligned region.

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