DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and dhx9

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001188373.1 Gene:dhx9 / 568043 ZFINID:ZDB-GENE-070912-171 Length:1270 Species:Danio rerio


Alignment Length:893 Identity:194/893 - (21%)
Similarity:336/893 - (37%) Gaps:226/893 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LRFWTEAQLNFLTAFLGHS------LSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDC--R 190
            |.:..|...|..|.....|      ..::|:.::|.:.|::...|....|:..:|..|||:.  .
Zfish   375 LNYQLEQDQNLQTILTERSQLPVKNFQEQIMSTIYNNPVVIIRGATGCGKTTQVPQYILDEFIKG 439

  Fly   191 NKKSNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAV-SSSTFIIYSTAQYFLRS 254
            .:.|:..|:..:.:.|.|...::|.:...||.:|::.|..:.:.|.: .....|::.|....||.
Zfish   440 GRASDCNIVVTQPRRISAVSVAERVSFERGEDVGKSCGYSVRFESFLPRPHASILFCTVGVLLRK 504

  Fly   255 LTSQQFRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQL 319
            |.| ..|.|||::|:::|..|..||.||..:|..:.::.::||:|:|...:...|.::|   ...
Zfish   505 LES-GIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPDVRVILMSATIDTTMFKEYF---FNC 565

  Fly   320 NMIKQPEVAPRVSYLNE--LHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGT 382
            .:|   ||..|...:.|  |..||.:......|                   ||:..:...:.|.
Zfish   566 PVI---EVHGRAHPVQEYFLEDCIQMTQFVPPP-------------------MDRKRKDKDDEGG 608

  Fly   383 DAALRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISL 447
            |.       .||.::. ....:|...|.|:   |:||:                           
Zfish   609 DE-------DVNCNVI-CGSEYSPETKRAM---SQLNE--------------------------- 635

  Fly   448 AAMNGNHECIDVLNSYSLHGYVVKSAKPDFV-DYDLIIDIMYLLRTKPEYSPGEYSPGNILIILP 511
              ...:.|.|:.|..| :....|..|...|: .::||..:...|...|.:...:|.      |||
Zfish   636 --KETSFELIEALLKY-IETLEVPGAVLVFLPGWNLIYSMQKHLEMNPHFGGHQYR------ILP 691

  Fly   512 TYYHIVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKV 576
            .:..|                           .|.:..:......|...||:|:|:|.|:.....
Zfish   692 LHSQI---------------------------PREEQRRVFEPVPDGVTKVILSTNIAETSITIN 729

  Fly   577 PFKYQIDTACRL--------NNV--YDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQ---CF 628
            ...:.:| :|:.        ||:  |.|.         |.:|..|.:|    :...|.|:   ||
Zfish   730 DVVFVLD-SCKQKVKLFTSHNNMTNYATV---------WASKTNLEQR----KGRAGRVRPGFCF 780

  Fly   629 RLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKK 693
            .|.|:..:|:|.....|.:....|.::.|::|||.... |..:|...|.||||..|..|...|::
Zfish   781 HLCSRARFEKLETHMTPEIFRTPLHEVALSIKLLRLGG-IGNFLSKAIEPPPLDAVIEAEHTLRE 844

  Fly   694 IDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDN 758
            :|.||..:::|.||..|..:|:..:||:|:|.|.:....|.:.||  |.:|..|  .||..:...
Zfish   845 LDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVCTI--SAATCFP--EPFISEGKR 905

  Fly   759 LWDRFTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEWQN-RM-----------HNR--TPPLYL 809
            |.     ::..:       .:.::||||...:.:::.|.. |:           |.|  .|.|.:
Zfish   906 LG-----FVHRN-------FAGSRFSDHVALLSVFQAWDEVRVGGEDAEIRFCEHKRLNMPTLRM 958

  Fly   810 KDEYEFMLNGLMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNI 874
            ..|.:..|..::..:......:::.:             .||:...: |..:|.:.||.|.|||:
Zfish   959 TWEAKVQLKEILVNVGFPEECLLNQV-------------FNNVGPDN-NLDLVISLLTFGSYPNV 1009

  Fly   875 -YAVDTR-------------KSSLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQK 925
             |..:.|             |||:...||.:...:|:        |..:..:..||..|..... 
Zfish  1010 CYHKEKRKILTTEGRNALIHKSSVNCPFSNHDLKYPS--------PFFVFGEKIRTRAISAKSM- 1065

  Fly   926 SHIVYATLVVPLAVAMFSGHPRIRLSPICDSEMSLTDRNVNVFIDEWI 973
                  |||.||.:.:|             ....:|.....|.:|:||
Zfish  1066 ------TLVSPLQLILF-------------GSKKITSNGEVVELDDWI 1094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 5/31 (16%)
ANK 407..>460 CDD:238125 7/52 (13%)
Ank_2 413..>460 CDD:289560 5/46 (11%)
HrpA <484..973 CDD:224557 114/529 (22%)
HA2 694..763 CDD:214852 22/68 (32%)
OB_NTP_bind 823..945 CDD:285018 28/135 (21%)
dhx9NP_001188373.1 DSRM 5..69 CDD:214634
DSRM 188..258 CDD:214634
DEXDc 400..580 CDD:214692 47/186 (25%)
DEXDc 413..553 CDD:238005 39/140 (28%)
Helicase_C 641..774 CDD:278689 35/180 (19%)
HA2 844..925 CDD:214852 26/96 (27%)
OB_NTP_bind 965..1079 CDD:285018 29/155 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.