DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and pea

DIOPT Version :10

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster


Alignment Length:906 Identity:181/906 - (19%)
Similarity:324/906 - (35%) Gaps:302/906 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RKSLMGKEDLELYADLVSMKANASDLPSLHLPLP--------------AIRPPNLRFWTEAQLNF 144
            |:..|.:.:.|:.|...|:..|..|      |||              |..||.:..|.:..:..
  Fly   508 REQKMLQREQEIEAMPTSLNKNWID------PLPEDESRSLAANMRGMAAAPPEVPEWKKHVIGG 566

  Fly   145 LTAFLG----------------HSLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKK 193
            ..:..|                :.|.|::::::..:::::........|:..: ...|.:| ...
  Fly   567 KKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQI-TQYLGEC-GFT 629

  Fly   194 SNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRS-LTS 257
            :..||.|.:.:.:.|...::|.|..:|.:||:.||..:.:....|..|.|.|.|....||. |..
  Fly   630 ARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLME 694

  Fly   258 QQFRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFF--------- 313
            .:.::.|.:::::.|....:||:|...::.|:.....|::::.|...:..||:.:|         
  Fly   695 AELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIP 759

  Fly   314 GEGLQLNMIKQPEVAPRVSYLNELHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYG 378
            |....:.::...|  |...||:.  |.|.:..||     .:|.|                    |
  Fly   760 GRTFPVEVLYTKE--PETDYLDA--SLITVMQIH-----LREPP--------------------G 795

  Fly   379 ELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQN 443
            ::        .|:              |||:..:..|.|:                    |::: 
  Fly   796 DI--------LLF--------------LTGQEEIDTACEI--------------------LYER- 817

  Fly   444 AISLAAMNGNHECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILI 508
                                      :||..||.                ||           ||
  Fly   818 --------------------------MKSLGPDV----------------PE-----------LI 829

  Fly   509 ILPTYYHIVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIE-SL 572
            |||.|            ..|...:|.    .::|           .|...:.|||:||:|.| ||
  Fly   830 ILPVY------------SALPSEMQT----RIFD-----------PAPAGSRKVVIATNIAETSL 867

  Fly   573 CLKVPFKYQIDTACRLNNVYDTTSCSGDDRFEWVAKDALLRRELILQP--------------NKG 623
            .:...| |.:|.......||:  |.:|.|             .|::.|              ..|
  Fly   868 TIDGIF-YVVDPGFVKQKVYN--SKTGMD-------------SLVVTPISQAAAKQRAGRAGRTG 916

  Fly   624 DVQCFRLISKEAY-EELSETSQPSLQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHH 686
            ..:.:||.::.|| :|:..|..|.:|...|....|.:|.:..|.::. :::    ..||:.::..
  Fly   917 PGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFM----DAPPVESLVM 977

  Fly   687 AVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIP 751
            |::.|..:..|||...:|.||.|:.:.|:...|.:|||..:.|:|.|.||||||.||        
  Fly   978 ALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLS-------- 1034

  Fly   752 FTEDIDNLWDRFTIYIQNSIKKERTYLSD------NQF-SDHFIFVRLYKEWQNRMHNRTPPLYL 809
                :.|::.|         .|::..|:|      ||. .||...:.:|..|:|   |:....:.
  Fly  1035 ----VQNVFYR---------PKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKN---NKFSNAWC 1083

  Fly   810 KDEYE-FMLNGLMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPN 873
               || |:....:::...:|.:::.       |..|.||.:.:..:.|..   ::.|:..|.:.|
  Fly  1084 ---YENFVQIRTLKRSQDVRKQLLG-------IMDRHKLDVVSAGKNSVR---IQKAICSGFFRN 1135

  Fly   874 IYAVDTRKSSLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQKSHIVYATLV 934
            ....|.::.......|..|.:||::.|                    .|||...::|..||
  Fly  1136 AAKKDPQEGYRTLVDSQVVYIHPSSAL--------------------FNRQPEWVIYHELV 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 DEAD-like_helicase_N 155..314 CDD:475120 34/168 (20%)
ANKYR <398..>460 CDD:440430 6/61 (10%)
ANK repeat 406..438 CDD:293786 5/31 (16%)
P-loop containing Nucleoside Triphosphate Hydrolases 465..>594 CDD:476819 30/129 (23%)
HA2 687..789 CDD:461295 34/108 (31%)
OB_NTP_bind 862..945 CDD:400182 15/73 (21%)
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189
HrpA 578..>1203 CDD:441249 166/830 (20%)
Blue background indicates that the domain is not in the aligned region.

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