DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and l(2)37Cb

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_609946.1 Gene:l(2)37Cb / 35192 FlyBaseID:FBgn0086444 Length:894 Species:Drosophila melanogaster


Alignment Length:847 Identity:161/847 - (19%)
Similarity:296/847 - (34%) Gaps:254/847 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 KSLMGKEDLELYAD-----LVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFLT------AF 148
            |....:|:.||..|     :.::..:.|...|      :.|.|.|   ||.:...||      :.
  Fly   197 KDAKAEEEYELLLDDQIDFIQALTLDGSREKS------SSRQPEL---TEKERKRLTLDETRRSL 252

  Fly   149 LGHSLSDEILQSLYASRVIVYNAALCWDKSVFLP--LVILDDCRNKKSNVKIMCIERQAILATYN 211
            ..:...::::.::...:|::........|:..:|  ||.....::||   .|.|.:.:.:.|...
  Fly   253 PVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGFTKDKK---MIGCTQPRRVAAMSV 314

  Fly   212 SQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQ-QFRNISHLVVNDVHLHD 275
            :.|.|...|.:||..||..:.:....|..|.:.|.|.....|...|: ...:.|.:::::.|...
  Fly   315 AARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTLHREFLSEPDLASYSVMIIDEAHERT 379

  Fly   276 PYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSC 340
            .:||||...::........|::::.|...:.:||:.||                           
  Fly   380 LHTDILFGLVKDIARFRPELKLLISSATLDAEKFSAFF--------------------------- 417

  Fly   341 IALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHS 405
                                                                   |.||: :|  
  Fly   418 -------------------------------------------------------DDAPI-FR-- 424

  Fly   406 LTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVV 470
            :.|:.                        |.||:|                            ..
  Fly   425 IPGRR------------------------YPVDIF----------------------------YT 437

  Fly   471 KSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHC--LTGSLQ 533
            |:.:.|::| ...:.::.:..|:|        .|:||:.|.....|.....::....  |...::
  Fly   438 KAPEADYID-ACCVSVLQIHATQP--------LGDILVFLTGQDEIETCQEVLHDRVKRLGSKIR 493

  Fly   534 ECSIFLLYDNMRNDYLQALV------NASDETVKVVLATDIIESLCLKVPFKYQIDTA-CRLNN- 590
            |..:..:|.|:.:| :||.:      ||.    ||:|||:|.|:........|.||.. .:.|| 
  Fly   494 ELIVIPVYANLPSD-MQAKIFEPTPPNAR----KVILATNIAETSLTIDNIIYVIDPGFAKQNNF 553

  Fly   591 ----------VYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQCFRLISKEAYE-ELSETSQ 644
                      |...:..|.:.|.....:.|         |.|    ||||.:..||: ||.:.:.
  Fly   554 NSRTGMESLMVVPISKASANQRAGRAGRTA---------PGK----CFRLYTAWAYKHELEDNTV 605

  Fly   645 PSLQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGC 708
            |.:|.:.|....|.:|.|..|.:|. ::|    .|||...:..|::.|..:..|:...::|.||.
  Fly   606 PEIQRINLGNAVLMLKALGINDLIHFDFL----DPPPHETLVLALEQLYALGALNHHGELTKLGR 666

  Fly   709 RLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYIQNSIKK 773
            |:.:.||...:|:||:.....:|.:.::||.:.||....:   |....|.:     |:...:.|.
  Fly   667 RMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAI---FYRPKDKI-----IHADTARKN 723

  Fly   774 ERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLTSIRSEIVSSLRAA 838
                 .::...||...:::|.:|....:: |...|    ..|:....|::...:|.::|      
  Fly   724 -----FNHMHGDHLSLLQVYNQWAETDYS-TQWCY----ENFIQYRSMKRARDVREQLV------ 772

  Fly   839 NLIHSRGKLSMNNLNQMSC---NWHMVKAALTGGMYPNIYAVDTRKSSLKSAFSGN--VSMHPNT 898
                  |.:....::.:||   ..::.|||..|..|   :.....|.........|  |.:|||:
  Fly   773 ------GLMQRVEIDMVSCLPETVNVRKAATAGYFY---HVARLSKGGHYKTIKHNQTVMIHPNS 828

  Fly   899 VL 900
            .|
  Fly   829 SL 830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 2/31 (6%)
ANK 407..>460 CDD:238125 5/52 (10%)
Ank_2 413..>460 CDD:289560 4/46 (9%)
HrpA <484..973 CDD:224557 100/444 (23%)
HA2 694..763 CDD:214852 17/68 (25%)
OB_NTP_bind 823..945 CDD:285018 17/83 (20%)
l(2)37CbNP_609946.1 HrpA 222..867 CDD:224557 156/822 (19%)
DEXDc 269..408 CDD:238005 31/141 (22%)
HELICc 491..581 CDD:197757 23/94 (24%)
HA2 651..735 CDD:214852 21/96 (22%)
OB_NTP_bind 770..869 CDD:285018 16/76 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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