Sequence 1: | NP_523832.2 | Gene: | bgcn / 47873 | FlyBaseID: | FBgn0004581 | Length: | 1215 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038953178.1 | Gene: | Ythdc2 / 307446 | RGDID: | 1563192 | Length: | 1434 | Species: | Rattus norvegicus |
Alignment Length: | 1226 | Identity: | 301/1226 - (24%) |
---|---|---|---|
Similarity: | 503/1226 - (41%) | Gaps: | 243/1226 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 QFPCTFRTSEHEAFANNARSLGLRSQVVHVNGNSCVKVYKQ--------------------ACRH 70
Fly 71 YLE------EPKTLVLSSGATLNMFTLLSRKSLMGKEDLELYADL--VSMKANASDLPSLHLPLP 127
Fly 128 AIRPPNLRFWTEAQLNFLTAFLGHSLSDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNK 192
Fly 193 KSNVKIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTS 257
Fly 258 --QQFRNISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFG------ 314
Fly 315 -------------------------EGLQLNMIKQPEVAPRVSYLNELHSC------------IA 342
Fly 343 LAGIHKGPDIYKEIPEAFRANNPRNE----------QMDKCL-QAYGELGTDAALRPFLYAVNYD 396
Fly 397 LAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPY--------------------IVDLFQ 441
Fly 442 Q----------NAISLAAMNGNH---ECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTK 493
Fly 494 PEYSPGEYSPGNILIILPTYYHIVKLNYMIL--SHCLTGSLQECSIFLLYDNMR-NDYLQALVNA 555
Fly 556 SDETVKVVLATDIIESLCLKVPFKYQIDTACRLNNVYDTTSCSGDDRFEWVAKDALLRRELILQP 620
Fly 621 NKGDVQ------CFRLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSP-NTIISEYLGITISP 678
Fly 679 PPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLS 743
Fly 744 TADPLGIPFTEDIDNLWDRFTIYIQNSIKKE----RTYLSDNQFSDHFIFVRLYKEWQNRMHNRT 804
Fly 805 PPLYLKDEYEFMLNGLMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGG 869
Fly 870 MYPNIYAVDTRKSSLKSAFSGNVSMHPNTVLRD----FLEPLNISA---QSFRTPWIVCNRQ-KS 926
Fly 927 H----IVYATLVVPLAVAMFSGHPRIRLSPI---------------CDSEM-SLTDRNVNVF-ID 970
Fly 971 EWIWMVMSKATAEMVMRTRYYFFKMYHDLLKHCSELDMWRRDCEPVSQYTVLT-DTLSKIFESED 1034
Fly 1035 GFVGFFKPPPITFLPTP----QLP--------SLYLLSVNAHFSWAREVEENMLSK 1078 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
bgcn | NP_523832.2 | ANK repeat | 406..438 | CDD:293786 | 9/51 (18%) |
ANK | 407..>460 | CDD:238125 | 18/85 (21%) | ||
Ank_2 | 413..>460 | CDD:289560 | 15/79 (19%) | ||
HrpA | <484..973 | CDD:224557 | 154/531 (29%) | ||
HA2 | 694..763 | CDD:214852 | 28/68 (41%) | ||
OB_NTP_bind | 823..945 | CDD:285018 | 40/133 (30%) | ||
Ythdc2 | XP_038953178.1 | R3H_DEXH_helicase | 50..108 | CDD:100077 | 10/38 (26%) |
HrpA | 193..>1020 | CDD:224557 | 230/887 (26%) | ||
DEXHc_YTHDC2 | 197..372 | CDD:350745 | 48/196 (24%) | ||
ANK repeat | 509..541 | CDD:293786 | 8/31 (26%) | ||
ANK repeat | 543..571 | CDD:293786 | 4/27 (15%) | ||
OB_NTP_bind | 975..1070 | CDD:400182 | 30/94 (32%) | ||
YTH | 1293..1422 | CDD:410979 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 41 | 1.000 | Domainoid score | I12199 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG48010 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | oto98855 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106429 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.820 |