DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and Dhx16

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:867 Identity:169/867 - (19%)
Similarity:296/867 - (34%) Gaps:277/867 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EEPK-TLVLSSGATLNMFTLLSRKSLMGKEDLELYADLVSMKANASDLPSLHLPLPAIRPPNLRF 136
            :||: .|||....|:.   .:....|.|.|:                 ||...||.|        
  Rat   351 QEPQYQLVLEEDETIE---FVRAAQLQGDEE-----------------PSSGPPLSA-------- 387

  Fly   137 WTEAQLNFLTAFLGHSL-----SDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNV 196
              :||.......:..||     .:|:|.::...:|::........|:..:|..:.::...|| .:
  Rat   388 --QAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKK-GM 449

  Fly   197 KIMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQ-QF 260
            ||.|.:.:.:.|...:.|.|...|.:||..||..:.:....|..|.:.|.|....||...|: ..
  Rat   450 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDL 514

  Fly   261 RNISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQP 325
            .:.|.::|::.|....:||||...|:........|:|::.|...:..:|:.||            
  Rat   515 ASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFF------------ 567

  Fly   326 EVAPRVSYLNELHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFL 390
                                                                             
  Rat   568 ----------------------------------------------------------------- 567

  Fly   391 YAVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHE 455
                 |.||| :|  :.|:.                        :.||:|               
  Rat   568 -----DDAPV-FR--IPGRR------------------------FPVDIF--------------- 585

  Fly   456 CIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLN 520
                         ..|:.:.|::: ..::.::.:..|:|        ||:||:.|.....|....
  Rat   586 -------------YTKAPEADYLE-ACVVSVLQIHVTQP--------PGDILVFLTGQEEIEAAC 628

  Fly   521 YMILSHC--LTGSLQECSIFLLYDNMRNDYLQALV--NASDETVKVVLATDIIESLCLKVPFKYQ 581
            .|:...|  |...::|..:..:|.|:.:| :||.:  .......|||:||:|.|:........|.
  Rat   629 EMLQDRCRRLGSKIRELLVLPIYANLPSD-MQARIFQPTPPGARKVVVATNIAETSLTIEGIIYV 692

  Fly   582 IDTACRLNNVYD---------TTSCSGDDRFEWVAKDALLRRELILQPNKGDV---QCFRLISKE 634
            :|........|:         .|.||         |.:..:|    ....|.|   :||||.:..
  Rat   693 LDPGFCKQKSYNPRTGMESLTVTPCS---------KASANQR----AGRAGRVAAGKCFRLYTAW 744

  Fly   635 AYE-ELSETSQPSLQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVL 697
            ||: ||.||:.|.:|...|..:.|.:|.|..:.::. ::|    .|||...:..|::.|..:..|
  Rat   745 AYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFL----DPPPYETLLLALEQLYALGAL 805

  Fly   698 DDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDR 762
            :...::|..|.::.::||...|.:|::......|.:.|||:.:.||                   
  Rat   806 NHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLS------------------- 851

  Fly   763 FTIYIQNSI---KKERTYLSDN---QF----SDHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFML 817
                :.|||   .|::...:||   .|    .||.:.:.:|.:|.              |..:..
  Rat   852 ----VNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWA--------------ESGYSS 898

  Fly   818 NGLMEQLTSIRSEIVSSLRAANLIHSR--GKLSMNNLNQMSC--NWHMVKAALTGGMYPNIYAVD 878
            ....|.....|     |:|.|..:..:  |.|....:...||  ::..|:.|:|.|.:.:...: 
  Rat   899 QWCYENFVQFR-----SMRRARDVREQLEGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARL- 957

  Fly   879 TRKSSLKSAFSGNVSMHPNTVL 900
            ||...........|.:|||:.|
  Rat   958 TRSGYRTVKQQQTVFIHPNSSL 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 1/31 (3%)
ANK 407..>460 CDD:238125 4/52 (8%)
Ank_2 413..>460 CDD:289560 3/46 (7%)
HrpA <484..973 CDD:224557 101/449 (22%)
HA2 694..763 CDD:214852 13/68 (19%)
OB_NTP_bind 823..945 CDD:285018 19/82 (23%)
Dhx16NP_997661.1 DEXDc 402..584 CDD:214692 47/291 (16%)
DEXDc 419..558 CDD:238005 34/139 (24%)
HELICc 583..740 CDD:238034 40/207 (19%)
HA2 801..885 CDD:214852 22/106 (21%)
OB_NTP_bind 920..1018 CDD:285018 15/61 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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