DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and rha-2

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_498895.1 Gene:rha-2 / 176207 WormBaseID:WBGene00015525 Length:1148 Species:Caenorhabditis elegans


Alignment Length:1028 Identity:187/1028 - (18%)
Similarity:352/1028 - (34%) Gaps:278/1028 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 TLLSRKSLMGKEDLELYADLVSMKANASDLPSLHLPLPAIRPPNLRFWTEAQLNFLTAFLGHSLS 154
            |:::||.::.:...|:       :.:.::||        |....:|.......|.:|...|.:.|
 Worm   214 TVINRKKVIVERSKEI-------QKSRAELP--------IFAEEMRIVEAINENLVTVVCGETGS 263

  Fly   155 ---DEILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKKSNVKIMCI-ERQAILATYNSQRT 215
               .:|.|.||.:                          ...|..:::.| |.:.:.|...:||.
 Worm   264 GKTTQIPQFLYEA--------------------------GYASEGELIGITEPRRVAAIAMAQRV 302

  Fly   216 ANFFGEQLG--ETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQ-QFRNISHLVVNDVHLHDPY 277
                |.:|.  :.|..|:.|....|.:|.|::.|....::.:... ..:..|.:::::.|....|
 Worm   303 ----GVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMY 363

  Fly   278 TDILLSE----IRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELH 338
            :|:|:..    :.:...:.:.||:|::|.   ..:..||..:.|      .|.:.|:|..::...
 Worm   364 SDVLIGMLSRIVPLRSKTARPLRLVIMSA---TLRLDDFTHKKL------FPLLTPKVIKVDARQ 419

  Fly   339 SCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFL---YAVNYDLA-- 398
            ..:::....:.||.|  |..|||.....:|.:           ...|:..|:   :.|...:.  
 Worm   420 FPVSVHFEKRTPDDY--IASAFRKTCRIHETL-----------PPGAILVFVTGQHEVKQLITKL 471

  Fly   399 ----PVNYRHSLTGKTAVHFASE-----LNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNH 454
                ||.|.....|:..|....|     :..|..::|..|....|...| |:.  :....|:|  
 Worm   472 KKRYPVVYETDKNGEVLVKGTKEWKEKKVEAAKSIKLEDFKEETPETED-FED--VDDGLMDG-- 531

  Fly   455 ECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNI------------- 506
               |.:|.        :.|...|.||:           :.|...|:.|.|.:             
 Worm   532 ---DDMNE--------RGAAEAFDDYE-----------EFENGDGDLSDGKVENSIGAPPADCEP 574

  Fly   507 LIILPTYYHIVKLNYMILSHCLTGSLQECSIFLLYDNMRNDYLQALVNASDETVK----VVLATD 567
            |..||.|             .|....::..:|                  |||..    .|::|:
 Worm   575 LYCLPLY-------------SLLSMGKQRRVF------------------DETPAGMRLCVISTN 608

  Fly   568 IIESLCLKVP-FKYQIDTACRLNNVYDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQ----- 626
            :.|: .|.:| .||.||.......:||  |.:|..||      |:.|    :....||.:     
 Worm   609 VAET-SLTIPGVKYVIDGGFEKRRLYD--SITGVSRF------AVCR----ISQASGDQRAGRAG 660

  Fly   627 ------CFRLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVH 685
                  .:||.|...|::..:.:.|.:.:...|::.|.:|.::...:::....   |.|....:.
 Worm   661 RISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFP---SAPDEQMLE 722

  Fly   686 HAVQFLKKIDVLDDAED-------VTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLS 743
            .|.:.|.::..|.::..       :|.||..|...|::....:.:........:...:.::|.||
 Worm   723 SAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLS 787

  Fly   744 TADPLGIPFTEDIDNLWDRFTIYIQNSIKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLY 808
            ..:|| ||.:....:..:.....::|.:|:.|.:.|...       .|...:.:..||..:    
 Worm   788 VREPL-IPVSSLRGDTPEETKELMKNVLKERRRWCSHTG-------ARRLGDLKVLMHAAS---- 840

  Fly   809 LKDEYEFMLNGLMEQLTSIRSEIVS-SLRAANLIHSRGKL--SMNNLNQMSCNWHMVKAALTGGM 870
                       :.||:.....|... .||...|:.:| ||  .:.|:...||..... |||...:
 Worm   841 -----------VAEQIKYNARECEKVGLRVKALVEAR-KLRQQLTNIVNASCKKEHA-AALDSDL 892

  Fly   871 YPNIYAVDTRKSSLK----SAFSGNV------SMHPNTVLRDFLEPLNISAQSFRTPW-IVCNRQ 924
            .|   ..|.:...|:    ::||..:      |:....|.:...|...|....|..|. :|...:
 Worm   893 PP---PTDQQAQLLRQMVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEE 954

  Fly   925 KSHIVYATLV------VPLAVAMFSGHPRIRLS--------------PICDSEMSLTDRNVNVFI 969
            ...::|..||      :..:|.........||:              ||.|....:..:.|.|..
 Worm   955 PEFVIYQELVQVNEKKLMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTF 1019

  Fly   970 DEWIWMV--MSKATAEMVMRTRYYFFKMYHDLLKHCSELDMWRRDCEPVSQYT 1020
            ....|.:  .:::....:|..||:...:...|:            .|.:.:||
 Worm  1020 GPLNWELPNENRSVPHDIMMYRYFALFLLDGLV------------FEKLKEYT 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 7/36 (19%)
ANK 407..>460 CDD:238125 12/57 (21%)
Ank_2 413..>460 CDD:289560 10/51 (20%)
HrpA <484..973 CDD:224557 102/558 (18%)
HA2 694..763 CDD:214852 13/75 (17%)
OB_NTP_bind 823..945 CDD:285018 30/141 (21%)
rha-2NP_498895.1 HrpA 218..989 CDD:224557 173/939 (18%)
DEXDc 254..394 CDD:238005 31/172 (18%)
P-loop_NTPase <350..>477 CDD:304359 26/148 (18%)
HELICc 577..662 CDD:197757 27/128 (21%)
HA2 730..822 CDD:214852 16/92 (17%)
OB_NTP_bind 870..990 CDD:285018 24/123 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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