DRSC/TRiP Functional Genomics Resources

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Protein Alignment bgcn and ddx-15

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_741147.1 Gene:ddx-15 / 175771 WormBaseID:WBGene00018967 Length:739 Species:Caenorhabditis elegans


Alignment Length:738 Identity:133/738 - (18%)
Similarity:260/738 - (35%) Gaps:233/738 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 IMCIERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLR-SLTSQQFR 261
            :.|.:.:.:.|...:.|.|......||:.||..:.:...:|..|.:.|.|....|| ::.|....
 Worm   132 VACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSPLLD 196

  Fly   262 NISHLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPE 326
            ....|::::.|.....||||:..|:..:.:..:::||::|...:..||..:|            |
 Worm   197 KYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRYF------------E 249

  Fly   327 VAPRVSYLNELHSCIALAGIHKGPDIYKEIP------EAFRANNPRNEQMDKCLQAYGELGTDAA 385
            ..|.:|                       :|      |.|...|...:.:            :||
 Worm   250 DCPLLS-----------------------VPGRTFPVEIFFTPNAEKDYL------------EAA 279

  Fly   386 LRPFLYAVNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAM 450
            :|..:                    .:|...|:..    .:|||:.....|.:..::....:.|:
 Worm   280 IRTVI--------------------QIHMVEEVEG----DILLFLTGQEEIEEACKRIDREIQAL 320

  Fly   451 NGNHECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPG---EYSPGNILIILPT 512
            ..:...:..:..||                           |.|..:..   |.:|.|       
 Worm   321 GADAGALSCIPLYS---------------------------TLPPAAQQRIFEPAPPN------- 351

  Fly   513 YYHIVKLNYMILSHC-LTGSLQECSIFLLYDNMRNDYLQALVNASDETVKVVLATDIIESLCLKV 576
                 :.|..|...| ::.::.|.|:.:       |.:..:::......||......:|||.:  
 Worm   352 -----RPNGAISRKCVISTNIAETSLTI-------DGVVFVIDPGFSKQKVYNPRIRVESLLV-- 402

  Fly   577 PFKYQIDTACRLNNVYDTTSCSGDDRFEWVAKDALLR--RELILQPNKGDVQCFRLISKEAY-EE 638
                     |.::..                 .|:.|  |....:|.|    ||||.::.|| .|
 Worm   403 ---------CPISKA-----------------SAMQRAGRAGRTKPGK----CFRLYTETAYGSE 437

  Fly   639 LSETSQPSLQTMQLDKICLAVKLLSPNTIIS-EYLGITISPPPLINVHHAVQFLKKIDVLDDAED 702
            :.:.:.|.:....|..:.|.:|.|....::. :::    .||....:..|::.|..:..::|..:
 Worm   438 MQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFM----DPPAPETLMRALELLNYLQAINDDGE 498

  Fly   703 VTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTIYI 767
            :|.||..:.:.|:..||.:|||....|.|.:.||:|.:.||            :...|.|     
 Worm   499 LTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLS------------VPQCWVR----- 546

  Fly   768 QNSIKKERTYLSDN---QFS----DHFIFVRLYKEWQNRMHNRTPPLYLKDEYEFMLNGLMEQLT 825
            .|.::.|    :|.   :|:    ||...:.:|..::   .|:..|.:..|  .|:....|:...
 Worm   547 PNEMRTE----ADEAKARFAHIDGDHLTLLNVYHSFK---QNQEDPQWCYD--NFINYRTMKTAD 602

  Fly   826 SIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHM------VKAALTGGMYPNI-------YAV 877
            ::|:::           || .:...||.::|.::..      ::.||..|.:..:       :.|
 Worm   603 TVRTQL-----------SR-VMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYV 655

  Fly   878 DTRKSSLKSAFSGNVSMHPNTVL 900
            ..:.:.|       |::||:|||
 Worm   656 TVKDNQL-------VNLHPSTVL 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 6/31 (19%)
ANK 407..>460 CDD:238125 7/52 (13%)
Ank_2 413..>460 CDD:289560 7/46 (15%)
HrpA <484..973 CDD:224557 86/445 (19%)
HA2 694..763 CDD:214852 18/68 (26%)
OB_NTP_bind 823..945 CDD:285018 17/91 (19%)
ddx-15NP_741147.1 Motor_domain 41..>106 CDD:277568
DEXDc 70..266 CDD:214692 33/168 (20%)
DEXDc 95..239 CDD:238005 25/106 (24%)
HELICc 327..419 CDD:197757 22/165 (13%)
HA2 489..572 CDD:214852 25/103 (24%)
OB_NTP_bind 607..709 CDD:285018 16/84 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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