DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and Dhx9

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:XP_011246220.1 Gene:Dhx9 / 13211 MGIID:108177 Length:1384 Species:Mus musculus


Alignment Length:1142 Identity:247/1142 - (21%)
Similarity:426/1142 - (37%) Gaps:335/1142 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YIPQQLLYF-LAGRRCCQQFPCTFRTSEH---EAFANNARSLGLRSQVVHVNGNSCVKVY----- 64
            :|.:..:|. ..|||...:        ||   :..|..:.:|.|..|:.|:   ..::.|     
Mouse   214 FIAEMTIYIKQLGRRIFAR--------EHGSNKKLAAQSCALSLVRQLYHL---GVIEAYSGLTK 267

  Fly    65 -KQACRHYLEEPKTLVLSSGATLNMFTLLSRKSLMGKEDLELYADLVSMKANASDLPSLHLPL-- 126
             |:..|   .||..:.||....|.:      ::::.:.|||:....|.        ||:.:.|  
Mouse   268 KKEGER---VEPYKVFLSPDLELQL------QNVVQELDLEIVPPPVD--------PSMPVILNI 315

  Fly   127 -------PAIR----------PP--NLRFWTEAQL------------------NFLTAFL--GHS 152
                   |:.|          ||  |...||.:.:                  |.||..:  .|:
Mouse   316 GKLAHFEPSQRQNAVGVVPWSPPQSNWNPWTSSNIDEGPLAYASTEQISMDLKNELTYQMEQDHN 380

  Fly   153 LSD---------------EILQSLYASRVIVYNAALCWDKSVFLPLVILDDC--RNKKSNVKIMC 200
            |..               |||:::.::.|::...|....|:..:|..||||.  .::.:...|:.
Mouse   381 LQSVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVV 445

  Fly   201 IERQAILATYNSQRTANFFGEQLGETVGIQLPYFSAV-SSSTFIIYSTAQYFLRSLTSQQFRNIS 264
            .:.:.|.|...::|.|...||:.|::.|..:.:.|.: .....|::.|....||.|.: ..|.||
Mouse   446 TQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEA-GIRGIS 509

  Fly   265 HLVVNDVHLHDPYTDILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAP 329
            |::|:::|..|..||.||..:|..:.::..:|:||:|...:...|.::|   ....:|   ||..
Mouse   510 HVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYF---FNCPII---EVYG 568

  Fly   330 RVSYLNE--LHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYA 392
            |...:.|  |..||.:.         :.||       |..::..|..:..|....||        
Mouse   569 RTFPVQEYFLEDCIQMT---------QFIP-------PPKDKKKKDKEDDGGEDDDA-------- 609

  Fly   393 VNYDLAPVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNH--- 454
             |.:|                                :..|.|    ..:..:|::.:|...   
Mouse   610 -NCNL--------------------------------ICGDEY----GPETKLSMSQLNEKETPF 637

  Fly   455 ECIDVLNSYSLHGYVVKSAKPDFVDYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKL 519
            |.|:.|..|                    |:.:.:             ||.:|:.||.:..|..:
Mouse   638 ELIEALLKY--------------------IETLNV-------------PGAVLVFLPGWNLIYTM 669

  Fly   520 NYMILSHCLTGSLQECSIFLLYDNM-RNDYLQALVNASDETVKVVLATDIIESLCLKVPFKYQID 583
            ...:.::...|| ....|..|:..: |.:..:......|...||:|:|:|.|:........|.||
Mouse   670 QKHLENNSHFGS-HRYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVID 733

  Fly   584 TACRL--------NNV--YDTTSCSGDDRFEWVAKDALLRRELILQPNKGDVQ---CFRLISKEA 635
             :|:.        ||:  |.|.         |.:|..|.:|    :...|.|:   ||.|.|:..
Mouse   734 -SCKQKVKLFTAHNNMTNYATV---------WASKTNLEQR----KGRAGRVRPGFCFHLCSRAR 784

  Fly   636 YEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDA 700
            ::.|.....|.:....|.:|.|::|||.... |.::|...|.||||..|..|...|:::|.||..
Mouse   785 FDRLETHMTPEMFRTPLHEIALSIKLLRLGG-IGQFLAKAIEPPPLDAVIEAEHTLRELDALDAN 848

  Fly   701 EDVTWLGCRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTEDIDNLWDRFTI 765
            :::|.||..|..:|:..:.|:|:|.|.:....|.:.||  |.:|..|  .||..:...|.     
Mouse   849 DELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTI--SAATCFP--EPFISEGKRLG----- 904

  Fly   766 YIQNSIKKERTYLSDNQFSDHFIFVRLYKEW----------------QNRMHNRTPPLYLKDEYE 814
            ||..:       .:.|:||||...:.:::.|                |.|::..|  |.:..|.:
Mouse   905 YIHRN-------FAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMAT--LRMTWEAK 960

  Fly   815 FMLNGLMEQLTSIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWHMVKAALTGGMYPNI-YAVD 878
            ..|..::     |.|..........:..:.|  ..|||:       :|.:.|..|:|||: |..:
Mouse   961 VQLKEIL-----INSGFPEDCLLTQVFTNTG--PDNNLD-------VVISLLAFGVYPNVCYHKE 1011

  Fly   879 TR-------------KSSLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIVCNRQKSHIVY 930
            .|             |||:...||.....:|:        |..:..:..||..|.....      
Mouse  1012 KRKILTTEGRNALIHKSSVNCPFSSQDMKYPS--------PFFVFGEKIRTRAISAKGM------ 1062

  Fly   931 ATLVVPLAVAMFSGHPRIRLSPICDSEMSLTDRNVNVFIDEWIWMVMSKATAEMVMRTRYYFFKM 995
             |||.||.:.:|:            |:...:|..: ||||:||.:.:|...|..:...|.....:
Mouse  1063 -TLVTPLQLLLFA------------SKKVQSDGQI-VFIDDWIRLQISHEAAACITALRAAMEAL 1113

  Fly   996 YHDLLKH---CSELDMWRRDCEPVSQYTVLTDTLSKI 1029
            ..::.|.   .|:||       ||:::  :.:|:.:|
Mouse  1114 VVEVSKQPNIISQLD-------PVNEH--MLNTIRQI 1141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 2/31 (6%)
ANK 407..>460 CDD:238125 6/55 (11%)
Ank_2 413..>460 CDD:289560 6/49 (12%)
HrpA <484..973 CDD:224557 126/532 (24%)
HA2 694..763 CDD:214852 21/68 (31%)
OB_NTP_bind 823..945 CDD:285018 30/135 (22%)
Dhx9XP_011246220.1 DSRM_DHX9_rpt1 3..71 CDD:380683
DSRM_DHX9_rpt2 181..255 CDD:380684 11/48 (23%)
DEXHc_DHX9 333..566 CDD:350730 55/239 (23%)
HrpA 337..>1055 CDD:224557 191/874 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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