DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bgcn and dhx32a

DIOPT Version :9

Sequence 1:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_001189401.3 Gene:dhx32a / 100006246 ZFINID:ZDB-GENE-130613-6 Length:728 Species:Danio rerio


Alignment Length:829 Identity:147/829 - (17%)
Similarity:275/829 - (33%) Gaps:244/829 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 EILQSLYASRVIVYNAALCWDKSVFLPLVILDDCRNKK-SNVKIMCIERQAILATYNSQRTANFF 219
            |.:..|..:::::.:......||..:|....:.|.:.: .:..::|.:.|...|...:.|.|:..
Zfish    60 EFMTLLENNQILIVSGTTKTGKSTQIPQWCAEFCLSAQYQHGVVVCSQIQRRQAVDLALRVADEM 124

  Fly   220 GEQLGETVGIQLPYFSAVSSSTFIIYSTAQYFLRSLTSQQ-FRNISHLVVNDVHLHDPYTDILLS 283
            ...:|..:|..:|..:..|:.|.:.|.|....||.:.|.. ......::|:..|.....||:||.
Zfish   125 DVNIGHEIGYSIPLETCCSNDTILRYCTDDILLREMMSDPLLEQYGVVLVDQAHERTVSTDVLLG 189

  Fly   284 EIRMALSSHQNLRVVLLSQMGNPKKFTDFFGEGLQLNMIKQPEVAPRVSYLNELHSCIALAGIHK 348
            .:|..|.....||:|:||....|:.....:|.            .||      ||.....||   
Zfish   190 LLREVLLQRPELRLVVLSAPPTPETLLTHYGS------------VPR------LHLEAPSAG--- 233

  Fly   349 GPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAVNYDLAPVNYRHSLTGKTAVH 413
                     |...:::..:|..      |      :|||         ||...:|....|..||.
Zfish   234 ---------EVIHSSSSSSESF------Y------SALR---------LALEVHRSREPGDVAVF 268

  Fly   414 FASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSYSLHGYVVKSAKPDFV 478
            .|:|                                    .|.:...|      .:.|.|     
Zfish   269 LATE------------------------------------QEVVCACN------IITKEA----- 286

  Fly   479 DYDLIIDIMYLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHCLTGSLQECSIFLLYDN 543
                         ::...|.||      |:.:|.              | :|....|        
Zfish   287 -------------SRMSVSLGE------LLAVPM--------------C-SGHAGIC-------- 309

  Fly   544 MRNDYLQALVNASDETVKVVLATDIIESLCLKV-PFKYQIDTACRLNNVYDTTSCSGDDRFEWVA 607
                  ..:..:...:.::.::...:|.|...| ...:.|||......||:....:..:....::
Zfish   310 ------PPVTESPQMSRRIFVSCSQLEDLFWSVDSIAFVIDTGVEKRLVYNPRLRASSEVIRPIS 368

  Fly   608 K-DALLRRELILQPNKGDVQCFRLISKEAYEELSETSQPSLQTMQLDKICLAVKLLSPNTIISEY 671
            | .|.:|::|.....|    ||.|..::.  :|.....|.:....:....|.:|.:       |.
Zfish   369 KCQAEMRKQLTGSTGK----CFCLYPEDV--QLPAEIHPRILESNITSTALFLKRM-------EA 420

  Fly   672 LGIT----ISPPPLINVHHAVQFLKKIDVLDDAEDVTWLGCRLMDIPVSCQLGRMLIFGILLRCL 732
            .|:|    |:.|....:..|::.|..:..||:..:::.:|..:.::|:..|:.:.|:......|.
Zfish   421 AGVTHCHFINRPDPEGLMQALEELDYLAALDNDGNLSEMGIIMSELPLEPQMAKALLASCEFDCA 485

  Fly   733 DPILTIVSSLSTAD-----PLGIPFTEDIDNLWDRFTIYIQNSIKKERTYLS-DNQFSDHFIFVR 791
            ..:|||.:.|:...     |:|: .||.:                  |.::. .:...|||..:.
Zfish   486 SEMLTIAAMLTAPSCFIEPPVGM-LTEVM------------------RCHMKFQHPEGDHFTLIN 531

  Fly   792 LYKEWQNRMHNRTPPLYLKD---EYEFMLNGLMEQLTSIRSEIVSSLRAANLIHSRGKL--SMNN 851
            :|..::   .::..|.:.::   |..::....::...:|||::...|:...|..|....  ..|.
Zfish   532 IYNTFK---RSQREPYFSQEQWCEQYYLCCAALQTADAIRSQLSDVLKRIELPISEPAFGTKTNA 593

  Fly   852 LNQMSCNWHMVKAALTGGMYPNIYA-VDTRKSSLKSAFSGNVSM--HPNTVLRDFLEPLNISAQS 913
            ||        :|.||..|.:..:.. ||.         |||..|  :.:......|......||.
Zfish   594 LN--------IKRALLAGYFMQMARDVDG---------SGNYFMLLNKHVAQAHRLSAYGAKAQK 641

  Fly   914 FRTP-WIVCN---------RQKSHIVYATLVVPLAVAMFSGHPRIRLSP 952
            ...| |::.:         |..:||              |.|..::::|
Zfish   642 LGLPEWLLFHEYSLTDNSIRTLTHI--------------SPHAFVQMAP 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 5/31 (16%)
ANK 407..>460 CDD:238125 6/52 (12%)
Ank_2 413..>460 CDD:289560 3/46 (7%)
HrpA <484..973 CDD:224557 87/499 (17%)
HA2 694..763 CDD:214852 15/73 (21%)
OB_NTP_bind 823..945 CDD:285018 28/136 (21%)
dhx32aNP_001189401.3 HrpA 14..>610 CDD:224557 130/738 (18%)
OB_NTP_bind 569..678 CDD:311586 28/139 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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