DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mst98Ca and Gm7137

DIOPT Version :9

Sequence 1:NP_524899.1 Gene:Mst98Ca / 47854 FlyBaseID:FBgn0002865 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_001477836.1 Gene:Gm7137 / 634504 MGIID:3779677 Length:236 Species:Mus musculus


Alignment Length:250 Identity:79/250 - (31%)
Similarity:90/250 - (36%) Gaps:78/250 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 PKRVCEPREVCQSILCQPK-PQTIDIPPPREYCCYPNGPINYKPSAACP-PCPIGPCAP----GG 184
            |:..|||...||:..|||. .||        .||.|:   ..:||...| ||....|.|    ..
Mouse    24 PESCCEPCCCCQTSCCQPSCCQT--------SCCQPS---CCQPSCCAPAPCLTLVCTPVSCVSS 77

  Fly   185 PCCPLPCFSTN--QYPVAEGRCGPCGPCGPGCGP---CGPRCGPCGP---GPC---GPCGPRCGP 238
            |||...|.:.:  |....:..|..|.||.|.|..   |.|.|  |.|   |||   ..|...|..
Mouse    78 PCCQSSCCTPSCCQQSSCQPACCTCSPCQPSCCVTLCCKPVC--CTPICSGPCCQQSSCQSSCCQ 140

  Fly   239 GGPCAVPNCGPCGLTMPSGPFVPAPCGPCAP-CGPCGPL--GNSPCGPCGP--CGP-CSPPCPYE 297
             .||.||.|                   |.| |  |.|:  |:|.|  |.|  |.| |..||...
Mouse   141 -SPCCVPIC-------------------CKPVC--CTPICSGSSSC--CQPSCCAPVCCKPCSSL 181

  Fly   298 S----PECGP--CYP----CAPTPWNTHCGPVGP----CGP----QVPCGPSGPC 334
            |    |.|.|  |.|    ||.:...:.|||...    |.|    |..||....|
Mouse   182 SLLCRPVCRPACCVPTSSCCASSCQPSCCGPTSSVSLLCRPACCRQACCGQKSSC 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mst98CaNP_524899.1 None
Gm7137XP_001477836.1 Keratin_B2 41..197 CDD:366678 59/192 (31%)
Keratin_B2_2 189..230 CDD:372783 12/40 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.