DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment crc and zip-9

DIOPT Version :9

Sequence 1:NP_001260672.1 Gene:crc / 47767 FlyBaseID:FBgn0000370 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001380203.1 Gene:zip-9 / 36805003 WormBaseID:WBGene00077761 Length:291 Species:Caenorhabditis elegans


Alignment Length:284 Identity:65/284 - (22%)
Similarity:110/284 - (38%) Gaps:61/284 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 NKVQFGASSDAASLPSAADYQLNDGPSLILQQLTPPQSPPQFDAYKQAGDAQPKPVLVKAEQK-- 190
            |.....::.|..:|.:...:|.|.      |..:.|.|.|.||        ...|.|..:|..  
 Worm    19 NSPTSSSNEDKHNLFNYQHHQHNH------QTYSSPISQPIFD--------HASPSLYTSEHSEY 69

  Fly   191 --VQCYTPDVTHAA--SATPFNFTN--WVGGSEIARENQLVDDIVNMRAKELELSTNWQQLNEDC 249
              .:.|:|:...::  |.:||.:|.  :....||..:...:|.::....:|:        :|||.
 Worm    70 SPAEIYSPNSASSSLPSTSPFPYTTSPFTATEEIYPDIPFIDSMIAEVRQEI--------INEDI 126

  Fly   250 ---ESQASSSLDSRSTGSGVCSSIA----------------DADEDW--VPELISSS---SSPAP 290
               ....||.:.|.|..|...||.:                |..:::  :.|.:..|   ::||.
 Worm   127 PVPSPSTSSDISSVSRKSSASSSSSLRDVFVSPGQTLVIRGDDGQEYKVIVERVEGSEAHATPAL 191

  Fly   291 T--TIEQSASQPKKRTRTYG---RGVEDRKI--RKKEQNKNAATRYRQKKKLEMENVLGEEHVLS 348
            |  .:...:....||.|...   ..:.|.:|  |||:||:.||.|||||.:......:..:..|:
 Worm   192 TKRKLSDDSDIAPKRARAPPVSLVNLSDEEIAERKKQQNRAAALRYRQKLRESRVMSVSVKETLT 256

  Fly   349 KENEQLRRTLQERHNEMRYLRQLI 372
            :.|..||...:....|...:|:||
 Worm   257 QRNAYLRDEAERLSKECEVIRRLI 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crcNP_001260672.1 bZIP_ATF4 313..374 CDD:269840 22/62 (35%)
coiled coil 315..374 CDD:269840 21/60 (35%)
zip-9NP_001380203.1 bZIP_ATF4 221..283 CDD:269840 21/60 (35%)
coiled coil 223..274 CDD:269840 17/50 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13044
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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