DRSC/TRiP Functional Genomics Resources

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Protein Alignment c(3)G and AT5G16730

DIOPT Version :9

Sequence 1:NP_650490.1 Gene:c(3)G / 47765 FlyBaseID:FBgn0000246 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_197175.1 Gene:AT5G16730 / 831536 AraportID:AT5G16730 Length:853 Species:Arabidopsis thaliana


Alignment Length:863 Identity:195/863 - (22%)
Similarity:339/863 - (39%) Gaps:233/863 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 KTQLFE-RSNEKPSKKRTPLVAPRVQQSKI-EAQTSQAVEKTQEDQTFAATIDSSTKSLK----- 101
            ||.|.| .:...|:.|.:| ..||:.:..: :::||.....:........::|.|:.:.|     
plant     6 KTSLSETTTTTTPTGKSSP-ATPRIAKRTVNKSETSNNNSPSTTTPHSRLSLDRSSPNSKSSVER 69

  Fly   102 KSP-------KNEGELWADIQKLSPHTGIIIHSF---IKQYNESLNNLKKKDLVVSKKMRAIAMD 156
            :||       |::..:.|.....||.|...:...   :|:.||.:::|:|.        :|.|:|
plant    70 RSPKLPTPPEKSQARVAAVKGTESPQTTTRLSQIKEDLKKANERISSLEKD--------KAKALD 126

  Fly   157 SL---KKKSENISLK--EKL-------TNMELELTQLKTDLIEQQEKNAENIQKYTEINKKYTHC 209
            .|   ||::|.::||  :.|       .|.|:|..|.....||..:.|.|.::|..|..|     
plant   127 ELKQAKKEAEQVTLKLDDALKAQKHVEENSEIEKFQAVEAGIEAVQNNEEELKKELETVK----- 186

  Fly   210 EQHYDKELEIIKVC--VEKKNSELR---DAQSRMALQAQE---------------------LNNM 248
            .||......::.|.  :||.|.||.   ||:|:...||::                     |..:
plant   187 NQHASDSAALVAVRQELEKINEELAAAFDAKSKALSQAEDASKTAEIHAEKVDILSSELTRLKAL 251

  Fly   249 QQTNRELAGACEN------------YKKDLE-----EAEV-AKSMILHELTDLKELHEDLQLQFE 295
            ..:.||.....:|            .|:|||     |||| .|.||:.:|.             .
plant   252 LDSTREKTAISDNEMVAKLEDEIVVLKRDLESARGFEAEVKEKEMIVEKLN-------------V 303

  Fly   296 DVSAQKEKFEANILQLSSDLNAKMLDCAQLEDRIEQLPIEANK-------ALSKLQRDLEASELQ 353
            |:.|.| ..|:|...||::..:|   ..:||:::|    ||||       :|..:.:.||.|   
plant   304 DLEAAK-MAESNAHSLSNEWQSK---AKELEEQLE----EANKLERSASVSLESVMKQLEGS--- 357

  Fly   354 FVDQQRLTDQATRELELVRNEINTFKTLIEEKERRHVSLSDELTQMTERLSELADINESYINELT 418
               ..:|.|..|...:|....:....|:.::||...|| ...|..:.|.:|:.....|...:||.
plant   358 ---NDKLHDTETEITDLKERIVTLETTVAKQKEDLEVS-EQRLGSVEEEVSKNEKEVEKLKSELE 418

  Fly   419 ETKLKHSQEIKDQADAYEIVVQELKESLNKASVDFTQLKSNSEKLHK------ETLLQVS----E 473
            ..|.:.::.:|.:.||.. .||.|.|..:|...|....|...||..|      ..|.:||    |
plant   419 TVKEEKNRALKKEQDATS-RVQRLSEEKSKLLSDLESSKEEEEKSKKAMESLASALHEVSSEGRE 482

  Fly   474 LQEKLIEMVSHRSNQE----ELIKRLGNE-----IQEKTHNFE------EELKRQQEQLANQMQM 523
            |:|||:....|....:    :|:.:..||     :.|..|..:      |:.|:..|......:|
plant   483 LKEKLLSQGDHEYETQIDDLKLVIKATNEKYENMLDEARHEIDVLVSAVEQTKKHFESSKKDWEM 547

  Fly   524 KATEVESENKRNAVEIQKLKSEL-----------EERNKAFKAQ---QDKLEYLISDHDTLKSAI 574
            |...:.:..|:...::..:..|:           ||.:.|:|.:   :|.|:.:..:...|:..:
plant   548 KEANLVNYVKKMEEDVASMGKEMNRLDNLLKRTEEEADAAWKKEAQTKDSLKEVEEEIVYLQETL 612

  Fly   575 INLQAEKKEIESELSTAKVKF------SEELQSQKDNLMKKVSELE-------LEIKRKETELIE 626
            ...:||..:::..|...:.:|      :|:|::::|..:||:.||.       |..|:.|.|..|
plant   613 GEAKAESMKLKENLLDKETEFQNVIHENEDLKAKEDVSLKKIEELSKLLEEAILAKKQPEEENGE 677

  Fly   627 L-EREKNNEM--AVLQF-----------KMNRINCLIDQP------------------------- 652
            | |.||:.::  .|::|           |..::..|..:|                         
plant   678 LSESEKDYDLLPKVVEFSSENGHRSVEEKSAKVETLDHEPPQEQISNGNSNGNGMEEKEVNGKPE 742

  Fly   653 VTTIKQLK--DSKGPTRTESIPT-------------KVQPENTDEFSSTARKRNARRQKITTYSS 702
            |.|.|:.|  :|:...:.:|:..             :..|:...|..|...:.::  .||.  .|
plant   743 VETEKKEKKDESQDDDKDDSVEVIFKMWESCQIEKKEAFPDKKSELESQEEEEDS--SKID--ES 803

  Fly   703 DFDSGDDIPIVGNSLSGK 720
            |..|.::|...||:|:.:
plant   804 DKTSTENIDETGNALTAE 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
c(3)GNP_650490.1 iSH2_PI3K_IA_R 363..>516 CDD:304922 43/177 (24%)
AT5G16730NP_197175.1 Smc 114..>447 CDD:224117 94/374 (25%)
Smc 382..>664 CDD:224117 63/283 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23160
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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