DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-p and malZ

DIOPT Version :10

Sequence 1:NP_536346.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_414937.2 Gene:malZ / 949131 ECOCYCID:EG10565 Length:604 Species:Escherichia coli


Alignment Length:547 Identity:100/547 - (18%)
Similarity:179/547 - (32%) Gaps:182/547 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NYASGRSGMVHLFEWKWDD-IAAEC--ENFLGPN--------------GYAGVQVSPVNENAVKD 70
            ::|:|:..::.    .||: :.|:.  ..|.|.:              |...:.::||.:     
E. coli   149 HHAAGQEIILR----DWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFK----- 204

  Fly    71 SRPWWERYQPISYK-LETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMA-----ADGGTYGTGG 129
             .|...:|....|: ::.:.|.:.....:......:|:|..:|.||||..     .|....||||
E. coli   205 -APSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGG 268

  Fly   130 STASPSSK-----------------SYPGVPYSSLDFNPTCAISNYNDANEVRNCELVGLRDLNQ 177
            :..:|.|.                 .|..:|  .||:.....:      ||:...|         
E. coli   269 ACHNPESPWRDWYSFSDDGTALDWLGYASLP--KLDYQSESLV------NEIYRGE--------- 316

  Fly   178 GNSYVQDKVVEFLDHLIDL--GVAGFRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSK----- 235
                  |.:|.   |.:..  .:.|:|:|.. ||    |....|...|:....|....:|     
E. coli   317 ------DSIVR---HWLKAPWNMDGWRLDVV-HM----LGEAGGARNNMQHVAGITEAAKETQPE 367

  Fly   236 AYIVQE---------VIDMGGEAISKSEYT----GLGAITEFRHSDSIGKVFRGKDQLQYLTNWG 287
            ||||.|         ..|:...|::...:|    |..|.|:..:           |..|......
E. coli   368 AYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISY-----------DPQQIDAQTC 421

  Fly   288 TAW------GFAASDRSLVF--VDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAHPFGTPRV 344
            .||      |.:...:..:|  :|:||..|.....|.|:.  ::|    :|..::...| |.|.:
E. coli   422 MAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIA--RLP----LAVVWLFTWP-GVPCI 479

  Fly   345 MSSFSFTDTDQGPPTTDGHNIASPIFNSDNSCSG--GWVCEHRWRQIYNMVAFRNTVGLDEIQNW 407
                 :...:.|   .||.|        |..|..  .|..|.:...::.:  ::..:.|.:....
E. coli   480 -----YYGDEVG---LDGKN--------DPFCRKPFPWQVEKQDTALFAL--YQRMIALRKKSQA 526

  Fly   408 WDNGSNQISFSRGS-----------RGFVAFNNDNYDLNSSLQTGLPAGTYCDVISGSKSGSSCT 461
            ..:|..|:.::..:           |..||.|.     ..:.:..|||..:.:.:..     .| 
E. coli   527 LRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINR-----GEACEVVLPASPFLNAVQW-----QC- 580

  Fly   462 GKTVTVGSDGRASIYIGSSEDDGVLAI 488
                   .:|...:      .||:||:
E. coli   581 -------KEGHGQL------TDGILAL 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_536346.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 82/440 (19%)
Aamy_C 405..493 CDD:214749 15/95 (16%)
malZNP_414937.2 PRK10785 1..596 CDD:236759 100/547 (18%)

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