DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-p and malS

DIOPT Version :10

Sequence 1:NP_536346.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_418028.1 Gene:malS / 948088 ECOCYCID:EG11316 Length:676 Species:Escherichia coli


Alignment Length:521 Identity:102/521 - (19%)
Similarity:161/521 - (30%) Gaps:171/521 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAVKDSRP------W----- 74
            |.:|...:.||..:..:...|:.. ..|.|......||       ||:..|.|      |     
E. coli   207 DQSYGRHKDGMAEIGTFHGGDLRG-LTNKLDYLQQLGV-------NALWISAPFEQIHGWVGGGT 263

  Fly    75 ---WERYQPISY------KLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMAADGGTYGTGGS 130
               :..|....|      .|:...|||....::|...:..|:|...|||.||         ||.:
E. coli   264 KGDFPHYAYHGYYTQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNH---------TGYA 319

  Fly   131 TASPSSKSYPGVPYSS------------LDFNPTCAIS--------NYND-------------AN 162
            |.:...:...|..|.|            .|:.|....:        |::|             ..
E. coli   320 TLADMQEYQFGALYLSGDEVKKSLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRT 384

  Fly   163 EVRNCELVGLRDLNQGNSYVQD-----------------------KVV------EFLDHLI---- 194
            ::.:.:..|..||....:::.|                       |.:      ::|.|.:    
E. coli   385 DIGDYDNPGFDDLTMSLAFLPDIKTESTTASGLPVFYKNKMDTHAKAIDGYTPRDYLTHWLSQWV 449

  Fly   195 -DLGVAGFRVDAAKHM----W---PADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEA-- 249
             |.|:.|||||.|||:    |   ..:.:......|..|.|.  |...|.:.      |.|||  
E. coli   450 RDYGIDGFRVDTAKHVELPAWQQLKTEASAALREWKKANPDK--ALDDKPFW------MTGEAWG 506

  Fly   250 --ISKSEY--TGLGAITEFRHSDSIGKVFRGKDQLQYLTNWGTAW--------GFAASDRSLVFV 302
              :.:|:|  .|..|:..|.:.:...|.      :..|....|.|        ||    ..|.::
E. coli   507 HGVMQSDYYRHGFDAMINFDYQEQAAKA------VDCLAQMDTTWQQMAEKLQGF----NVLSYL 561

  Fly   303 DNHDNQ--RGHGAGGADVLTYKVPKQYKMASAFMLAHPFGTPRVMSSFSFTDTDQGPPTTDGHNI 365
            .:||.:  |..|...|::|.. .|...::......:.||| |........|.:|.......|.:.
E. coli   562 SSHDTRLFREGGDKAAELLLL-APGAVQIFYGDESSRPFG-PTGSDPLQGTRSDMNWQDVSGKSA 624

  Fly   366 ASPIFNSDNSCSGGWVCEHRWRQIYNMVAFRNTVGLDEIQNWWDNGSNQISFSRGSRGFVAFNND 430
            ||..               .|::|....|....:|.         |.......:...|||..:.|
E. coli   625 ASVA---------------HWQKISQFRARHPAIGA---------GKQTTLLLKQGYGFVREHGD 665

  Fly   431 N 431
            :
E. coli   666 D 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_536346.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 94/480 (20%)
Aamy_C 405..493 CDD:214749 5/27 (19%)
malSNP_418028.1 malS 1..676 CDD:236543 102/521 (20%)

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