DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amy-p and slc3a2a

DIOPT Version :9

Sequence 1:NP_001286518.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_571676.2 Gene:slc3a2a / 796322 ZFINID:ZDB-GENE-000831-3 Length:485 Species:Danio rerio


Alignment Length:133 Identity:28/133 - (21%)
Similarity:49/133 - (36%) Gaps:32/133 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 SGGWVCEHRWRQIYNMVAFRNTVG-----------------LDEIQNWWDNG-----SNQISFSR 419
            :.||| ..||..:  ::.:...||                 :.|: :||:.|     ||..:||:
Zfish    62 TAGWV-RTRWALL--VLFWLGWVGMLAGAIVIIVQAPRCKPIPEM-HWWNEGPLYQISNLDAFSK 122

  Fly   420 -GSRGFVAFNNDNYDLNSSLQT-GLPAGTYCDVISGSKSGSSCTGKTVTVGSDGRASIYIGSSED 482
             |.:|.    .:..|..|.::. ||..|....|.:...|....|......||:...:..:..:..
Zfish   123 NGLKGV----EEKLDYLSQMKVKGLVLGPVHSVQADQSSALELTSINPDFGSESELTSLLDRAHR 183

  Fly   483 DGV 485
            .|:
Zfish   184 KGI 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_001286518.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 5/21 (24%)
Alpha-amylase 54..342 CDD:278554
Aamy_C 405..493 CDD:214749 20/88 (23%)
slc3a2aNP_571676.2 SLC3A2_N 42..111 CDD:292647 11/52 (21%)
AmyAc_SLC3A2 94..396 CDD:200483 21/98 (21%)
AmyA 125..445 CDD:223443 12/66 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.