DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-p and Slc3a2

DIOPT Version :10

Sequence 1:NP_536346.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_062156.2 Gene:Slc3a2 / 50567 RGDID:3073 Length:566 Species:Rattus norvegicus


Alignment Length:474 Identity:89/474 - (18%)
Similarity:153/474 - (32%) Gaps:188/474 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 ECENFLGP--NGYAGVQ---------------VSPVNENAVKDSRPWWERYQPISYKLETRSGNE 92
            :.:.|:||  .|.||::               :.|:::|. ||     |..:....:::...|::
  Rat   161 DLQAFVGPEARGIAGLKNHLEYLSTLKVKGLVLGPIHKNQ-KD-----EVNETDLKQIDPDLGSQ 219

  Fly    93 EQFASMVKRCNAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGVPYSSLDFNPTCAISN 157
            |.|..:::                                |...||.    :..||..|     |
  Rat   220 EDFKDLLQ--------------------------------SAKKKSI----HIILDLTP-----N 243

  Fly   158 YNDANE---VRNCELVGLRDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMWPAD--LAVI 217
            |...|.   ....::|..:.....:|::||            ||.||:|.....:..|.  ||..
  Rat   244 YKGQNAWFLPPQADIVATKMKEALSSWLQD------------GVDGFQVRDVGKLANASLYLAEW 296

  Fly   218 YGRLKNLNTDHGFASGSKAYIVQEVID---------MGGEAISKSEYTGLGAITEFRHSDSIGKV 273
            ....||.:.|....:|:.:..:|::::         :....:|:..:||       .|::.:   
  Rat   297 QNITKNFSEDRLLIAGTASSDLQQIVNILESTSDLLLTSSYLSQPVFTG-------EHAELL--- 351

  Fly   274 FRGKDQLQYLTNWGTAW-GFAASDRSLVFVDNHDNQRGHGAGGADVLTYKVPKQYKMASAFMLAH 337
                 .::||...|:.| .::.|.                   |.:||..:|.|:......:|..
  Rat   352 -----VIKYLNATGSRWCSWSVSQ-------------------AGLLTSFIPAQFLRLYQLLLFT 392

  Fly   338 PFGTPRVMSSFSFTDTDQG--PPTTDGHNIASPIF---NSDNSCSGGWVCEHRWRQIYNMVAFRN 397
            ..|||    .||:.| :.|  .....|..:.:|..   .|.||            |..:.|:...
  Rat   393 LPGTP----VFSYGD-ELGLQAVALPGQPMEAPFMLWNESSNS------------QTSSPVSLNM 440

  Fly   398 TV-GLDEIQNWWDNGSNQISFSR--------------------GSRGFVAF-----NNDNY---- 432
            || |.:|     |.||....|.|                    .|.|..::     .|:.|    
  Rat   441 TVKGQNE-----DPGSLLTQFRRLSDLRGKERSLLHGDFDALSSSSGLFSYVRHWDQNERYLVVL 500

  Fly   433 ---DLNSSLQTG---LPAG 445
               |:..|.:.|   ||||
  Rat   501 NFQDVGLSARVGASNLPAG 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_536346.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 69/390 (18%)
Aamy_C 405..493 CDD:214749 16/76 (21%)
Slc3a2NP_062156.2 SLC3A2_N 81..157 CDD:464983
AmyAc_family 139..469 CDD:476817 78/422 (18%)
Blue background indicates that the domain is not in the aligned region.

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