DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-p and amy2a

DIOPT Version :10

Sequence 1:NP_536346.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_998176.2 Gene:amy2a / 406539 ZFINID:ZDB-GENE-040426-2393 Length:512 Species:Danio rerio


Alignment Length:513 Identity:286/513 - (55%)
Similarity:355/513 - (69%) Gaps:25/513 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSIVCLALLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAVK 69
            |.::..||:.::.||||.|..|||:.:||||||:|.|||||||.:|||||:.|||:||.:|:.|.
Zfish     2 KLLILAALVGLSLAQFDPNTKSGRTAIVHLFEWRWADIAAECERYLGPNGFGGVQISPPSESIVV 66

  Fly    70 DS--RPWWERYQPISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMAADG---GTYGTGG 129
            .:  .|||:|||||.|.|.:|||||.:...|:.|||.|||..|||.|.|||...|   ||:.:.|
Zfish    67 TNPWHPWWQRYQPIGYNLCSRSGNENELKDMITRCNNVGVNIYVDAVINHMCGSGGGSGTHSSCG 131

  Fly   130 STASPSSKSYPGVPYSSLDFNP-TC-----AISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVE 188
            |..:.::|.:|.||||:||||. .|     .|.||.|.|:||||.||||.||.....||:.||.:
Zfish   132 SYFNANNKDFPTVPYSNLDFNDGKCNTGSGNIENYQDINQVRNCRLVGLLDLALEKDYVRSKVAD 196

  Fly   189 FLDHLIDLGVAGFRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKS 253
            :::.|||:|||||||||.|||||.||:.:||||.|||| ..|.||:|.:|.|||||:|||.|:.|
Zfish   197 YMNKLIDMGVAGFRVDACKHMWPGDLSAVYGRLHNLNT-RWFPSGAKPFIFQEVIDLGGEPITSS 260

  Fly   254 EYTGLGAITEFRHSDSIGKVFR--GKDQLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGA 316
            ||||:|.:|||::...:|.:.|  ..::|.||.|||..|||..||::||||||||||||||||||
Zfish   261 EYTGIGRVTEFKYGAKLGNIIRKWNGEKLSYLKNWGEGWGFMPSDKALVFVDNHDNQRGHGAGGA 325

  Fly   317 DVLTYKVPKQYKMASAFMLAHPFGTPRVMSSFSF-----TDTDQ----GPPTT-DGHNIASPIFN 371
            .::|:...:.||||..||||||:|..|||||:.:     ...||    |||:. ||.....|| |
Zfish   326 SIVTFWDARLYKMAVGFMLAHPYGFTRVMSSYRWDRNIVNGQDQNDWIGPPSNGDGSTKPVPI-N 389

  Fly   372 SDNSCSGGWVCEHRWRQIYNMVAFRNTVGLDEIQNWWDNGSNQISFSRGSRGFVAFNNDNYDLNS 436
            .|::|...||||||||||.|||.|||.|......||||||||||:||||||||:..|||:::||.
Zfish   390 PDSTCGDNWVCEHRWRQIKNMVIFRNVVNGQPFSNWWDNGSNQIAFSRGSRGFIIINNDDWELNV 454

  Fly   437 SLQTGLPAGTYCDVISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ||.||||.|||||||||.|....||||.|.||.||:||..|.:.|:|..:|||.::||
Zfish   455 SLSTGLPGGTYCDVISGQKENGRCTGKEVNVGGDGKASFRISNQEEDPFIAIHADSKL 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_536346.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 217/393 (55%)
Aamy_C 405..493 CDD:214749 56/87 (64%)
amy2aNP_998176.2 AmyAc_bac_euk_AmyA 25..417 CDD:200456 217/393 (55%)
Aamy_C 424..511 CDD:214749 56/86 (65%)

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