DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amy-p and Mal-A3

DIOPT Version :10

Sequence 1:NP_536346.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_476628.2 Gene:Mal-A3 / 35826 FlyBaseID:FBgn0002571 Length:574 Species:Drosophila melanogaster


Alignment Length:498 Identity:100/498 - (20%)
Similarity:167/498 - (33%) Gaps:139/498 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FLGPNGYAGVQVSPVNENAVKDSRPWWERYQPISYK-LETRSGNEEQFASMVKRCNAVGVRTYVD 112
            :|...|.....:||:..:.:.|.     .|.....| ::...|..|.|.:::.|...:.::..:|
  Fly    57 YLKEIGITATWLSPIFTSPMADF-----GYDVADLKGIDPIFGTMEDFEALLARAKELDIKIILD 116

  Fly   113 VVFNHMAADGGTYGTGGSTASPSSKSY----PGVPYSSLDFNPTCAISNYNDA----NEVRNCEL 169
            .|.|| .:|...:....:......|.:    .|...:.:...||..:|.:..:    ||.|....
  Fly   117 FVPNH-TSDECDWFIRSAAGEEEYKDFYVWHTGKVVNGIRQPPTNWVSVFRGSMWTWNEQRQAYY 180

  Fly   170 V-----GLRDLNQGNSYVQDKVVEFLDHLIDLGVAGFRVDAAKHMW--PADL-----------AV 216
            :     ...|||..|..|.:.:.:.|...:..|..|||:||..|::  |||.           ||
  Fly   181 LHQFHAKQPDLNYRNPKVVEAMKDVLRFWLRKGAYGFRIDAVPHVYEIPADADGNWPDEPRNEAV 245

  Fly   217 I----YGRLKNLNTDHGFASGSKAYIVQEVI-----DMGG-------EAISKSEY--------TG 257
            .    |..|:::.|.....:....|..::||     ::||       ||.|..|.        |.
  Fly   246 SDPEDYTYLQHIYTTDQPETLELVYAFRDVIEEIDAELGGDDRVLLTEAYSPLEVLMQYYGNGTH 310

  Fly   258 LGAITEFRHSDSIGKVFRGKDQLQY---LTNW------GTA--WGFAASDRSLVFVDNHDNQRGH 311
            ||:...| :.:.:.|:....|...|   :.||      |..  |.|.          |||..|..
  Fly   311 LGSQIPF-NFELLAKISYSSDAYHYSELIHNWLDNMPEGQVANWVFG----------NHDQSRIG 364

  Fly   312 GAGGADVLTYKVPKQYKMASAFMLAHPFGTPRVMSSF-----SFTDT-----DQGPPTTDGHN-- 364
            ...|||          ::.:..|:.  .|.|.|..::     ..||.     |...|.....|  
  Fly   365 SRLGAD----------RIDACNMII--LGLPGVSVTYQGEEMGMTDVWISWEDTVDPQACQSNEQ 417

  Fly   365 ---------IASPIFNSDNSCSGGWVCEHRWRQI---YNMVAFRNTVGL--------DEIQNWWD 409
                     :.:|...||...:|.......|..:   |.:|..:...|:        .:::...|
  Fly   418 EFERLTRDPVRTPFQWSDEVNAGFSNASVTWLPVASNYKLVNVKKERGIALSHLNVYKQLRALRD 482

  Fly   410 N-------------GSNQISFSR---GSRGFVAFNNDNYDLNS 436
            .             |.|.::|.|   |.:.::...|.|.|:.|
  Fly   483 EPTLKQGDVSVTAIGPNVLAFKRSLAGYKSYITLININDDVES 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_536346.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 89/435 (20%)
Aamy_C 405..493 CDD:214749 10/48 (21%)
Mal-A3NP_476628.2 AmyAc_maltase 22..490 CDD:200467 91/461 (20%)

Return to query results.
Submit another query.