DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-p and mde5

DIOPT Version :9

Sequence 1:NP_001286518.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001343001.1 Gene:mde5 / 3361499 PomBaseID:SPAC25H1.09 Length:513 Species:Schizosaccharomyces pombe


Alignment Length:326 Identity:70/326 - (21%)
Similarity:118/326 - (36%) Gaps:92/326 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAVKDSRPWWERY-----QP 80
            |..|..|          .|..|..:.:...| .|:..:.:||:.:| ::....:.|.|     |.
pombe    56 DREYCGG----------NWRGIIDKLDYIQG-MGFTAIWISPIIKN-IEGRTKYGEAYHGYWPQD 108

  Fly    81 ISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMAADGGTYGTGGSTASPSSKSYPGV--P 143
            : |.|....|.|:....:....:..|:...||.|.|||           .::.|.:..| |:  |
pombe   109 L-YTLNPHFGTEQDLIDLADALHDRGMYLMVDTVVNHM-----------GSSDPRNIDY-GIYRP 160

  Fly   144 YS-SLDFNPTCAISNYNDANEVRNC----ELVGLRDLNQGNSYVQDKVVEFL-DHLIDLGVAGFR 202
            :: |..::|.|.|.. :....:..|    |.:.|.|::..|..:.:.:..|: |.:....:.|.|
pombe   161 FNQSSHYHPMCPIEQ-DKPLSLEQCWIGTEDMTLPDIDTENPQIIETLYNFIHDQVKQFKIDGLR 224

  Fly   203 VDAAKHM----WP--ADLAVIY-------GRLKNLNTDHGFASGSKAYIVQ-----EVIDMGGEA 249
            |||.||:    ||  .:.|.:|       |:.........:..|...:.||     .||.:...|
pombe   225 VDATKHVRRTFWPGFCESAGVYCQGEEWTGQADLFCEWQEYMDGLHNFPVQGVAAESVIPLNDRA 289

  Fly   250 ISK----------------------------------SEYTGL-GAITEFRHSDSIGKVFRGKDQ 279
            :.|                                  ::||.| .|:|....||.|..||.|::|
pombe   290 LRKTAIAMNLVAHHCKDSTLLGLFLESQDAPRLAALNNDYTVLKNAMTLNLMSDGIPIVFYGQEQ 354

  Fly   280 L 280
            :
pombe   355 M 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_001286518.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 67/319 (21%)
Alpha-amylase 54..342 CDD:278554 64/293 (22%)
Aamy_C 405..493 CDD:214749
mde5NP_001343001.1 AmyAc_euk_AmyA 26..396 CDD:200458 70/326 (21%)
DUF1966 410..488 CDD:312682
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4468
SonicParanoid 1 1.000 - - X338
TreeFam 00.000 Not matched by this tool.
43.840

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