DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amy-p and Amy1

DIOPT Version :9

Sequence 1:NP_001286518.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001103975.1 Gene:Amy1 / 11722 MGIID:88019 Length:511 Species:Mus musculus


Alignment Length:512 Identity:278/512 - (54%)
Similarity:349/512 - (68%) Gaps:24/512 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSIVCLALLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAV- 68
            |..:.|:|:....||:|.:...||:.:||||||:|.|||.|||.:|.|||:|||||||.|||.| 
Mouse     2 KFFLLLSLIGFCWAQYDPHTQYGRTAIVHLFEWRWVDIAKECERYLAPNGFAGVQVSPPNENIVV 66

  Fly    69 -KDSRPWWERYQPISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHM---AADGGTYGTGG 129
             ..||||||||||||||:.:|||||::|..||.|||.||||.|||.|.|||   .|..|...|.|
Mouse    67 HSPSRPWWERYQPISYKICSRSGNEDEFRDMVNRCNNVGVRIYVDAVINHMCGVGAQAGQSSTCG 131

  Fly   130 STASPSSKSYPGVPYSSLDFNP-TC-----AISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVE 188
            |..:|:::.:||||||..|||. .|     .|.||.||.:||:|.|.||.||.....||:.||.:
Mouse   132 SYFNPNNRDFPGVPYSGFDFNDGKCRTASGGIENYQDAAQVRDCRLSGLLDLALEKDYVRTKVAD 196

  Fly   189 FLDHLIDLGVAGFRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKS 253
            :::||||:||||||:||:|||||.|:..|..:|.|||| ..|:.||:.:|.|||||:||||:|.:
Mouse   197 YMNHLIDIGVAGFRLDASKHMWPGDIKAILDKLHNLNT-KWFSQGSRPFIFQEVIDLGGEAVSSN 260

  Fly   254 EYTGLGAITEFRHSDSIGKVFRGKD--QLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGA 316
            ||.|.|.:|||::...:|||.|..|  ::.||.|||..||...|||:||||||||||||||||||
Mouse   261 EYFGNGRVTEFKYGAKLGKVMRKWDGEKMSYLKNWGEGWGLMPSDRALVFVDNHDNQRGHGAGGA 325

  Fly   317 DVLTYKVPKQYKMASAFMLAHPFGTPRVMSSFSFTDTDQ---------GPPTTDGHNIASPIFNS 372
            .:||:...:.||||..||||||:|..|||||:.:....|         |||..:|......| |.
Mouse   326 SILTFWDARLYKMAVGFMLAHPYGFTRVMSSYYWPRNFQNGKDVNDWVGPPNNNGKTKEVSI-NP 389

  Fly   373 DNSCSGGWVCEHRWRQIYNMVAFRNTVGLDEIQNWWDNGSNQISFSRGSRGFVAFNNDNYDLNSS 437
            |::|...|:||||||||.|||||||.|......|||||.|||::|.||::||:.||||::.|:.:
Mouse   390 DSTCGNDWICEHRWRQIRNMVAFRNVVNGQPFANWWDNDSNQVAFGRGNKGFIVFNNDDWALSET 454

  Fly   438 LQTGLPAGTYCDVISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ||||||||||||||||.|...:|||..|.||:||:|...|.:|.:|..:|||..:|:
Mouse   455 LQTGLPAGTYCDVISGDKVDGNCTGIKVYVGNDGKAHFSISNSAEDPFIAIHAESKI 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_001286518.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 219/392 (56%)
Alpha-amylase 54..342 CDD:278554 172/300 (57%)
Aamy_C 405..493 CDD:214749 50/87 (57%)
Amy1NP_001103975.1 AmyAc_bac_euk_AmyA 25..416 CDD:200456 219/392 (56%)
AmyA 46..>315 CDD:223443 150/269 (56%)
Aamy_C 422..510 CDD:214749 50/87 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833809
Domainoid 1 1.000 273 1.000 Domainoid score I1776
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 573 1.000 Inparanoid score I1047
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53143
OrthoDB 1 1.010 - - D231864at33208
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 1 1.000 - - mtm8751
orthoMCL 1 0.900 - - OOG6_103366
Panther 1 1.100 - - O PTHR43447
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X338
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.770

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