DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amy-p and Amy2a1

DIOPT Version :9

Sequence 1:NP_001286518.1 Gene:Amy-p / 47764 FlyBaseID:FBgn0000079 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_036019386.1 Gene:Amy2a1 / 100043207 MGIID:104548 Length:508 Species:Mus musculus


Alignment Length:510 Identity:281/510 - (55%)
Similarity:353/510 - (69%) Gaps:23/510 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSIVCLALLAVANAQFDTNYASGRSGMVHLFEWKWDDIAAECENFLGPNGYAGVQVSPVNENAV- 68
            |.::.|:|:....||:|.:.:.||:.:||||||:|.|||.|||.:|.|.|:.||||||.|||.| 
Mouse     2 KFVLLLSLIGFCWAQYDPHTSDGRTAIVHLFEWRWVDIAKECERYLAPKGFGGVQVSPPNENVVV 66

  Fly    69 -KDSRPWWERYQPISYKLETRSGNEEQFASMVKRCNAVGVRTYVDVVFNHMAADG---GTYGTGG 129
             ..||||||||||||||:.||||||::|..||.|||.||||.|||.|.|||...|   ||..|.|
Mouse    67 HNPSRPWWERYQPISYKICTRSGNEDEFRDMVTRCNNVGVRIYVDAVINHMCGAGNPAGTSSTCG 131

  Fly   130 STASPSSKSYPGVPYSSLDFNPT-C--AISNYNDANEVRNCELVGLRDLNQGNSYVQDKVVEFLD 191
            |..:|:::.:|.||||:.|||.. |  .|.|||||.:||||.|.||.||.....||:.||.::::
Mouse   132 SYLNPNNREFPAVPYSAWDFNDNKCNGEIDNYNDAYQVRNCRLTGLLDLALEKDYVRTKVADYMN 196

  Fly   192 HLIDLGVAGFRVDAAKHMWPADLAVIYGRLKNLNTDHGFASGSKAYIVQEVIDMGGEAISKSEYT 256
            ||||:||||||:||||||||.|:..:..:|.|||| ..|:.||:.:|.|||||:|||||..|||.
Mouse   197 HLIDIGVAGFRLDAAKHMWPGDIKAVLDKLHNLNT-KWFSQGSRPFIFQEVIDLGGEAIKGSEYF 260

  Fly   257 GLGAITEFRHSDSIGKVFR--GKDQLQYLTNWGTAWGFAASDRSLVFVDNHDNQRGHGAGGADVL 319
            |.|.:|||::...:|.|.|  ..:::.||.|||..||...|||:|||||||||||||||||:.:|
Mouse   261 GNGRVTEFKYGAKLGTVIRKWNGEKMSYLKNWGEGWGMVPSDRALVFVDNHDNQRGHGAGGSSIL 325

  Fly   320 TYKVPKQYKMASAFMLAHPFGTPRVMSSFSFTDTDQ---------GPPTTDGHNIASPI-FNSDN 374
            |:...:.||||..||||||:|..|||||:.:....|         |||..:|  :...: .|:|.
Mouse   326 TFWDARMYKMAVGFMLAHPYGFTRVMSSYRWNRNFQNGKDQNDWIGPPNNNG--VTKEVTINADT 388

  Fly   375 SCSGGWVCEHRWRQIYNMVAFRNTVGLDEIQNWWDNGSNQISFSRGSRGFVAFNNDNYDLNSSLQ 439
            :|...||||||||||.|||||||.|......|||||.|||::||||:|||:.||||::.|:::||
Mouse   389 TCGNDWVCEHRWRQIRNMVAFRNVVNGQPFSNWWDNNSNQVAFSRGNRGFIVFNNDDWALSATLQ 453

  Fly   440 TGLPAGTYCDVISGSKSGSSCTGKTVTVGSDGRASIYIGSSEDDGVLAIHVNAKL 494
            ||||||||||||||.|...:|||..|.|||||:|...|.:|.:|..:|||.::||
Mouse   454 TGLPAGTYCDVISGDKVDGNCTGLRVNVGSDGKAHFSISNSAEDPFIAIHADSKL 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Amy-pNP_001286518.1 AmyAc_bac_euk_AmyA 28..399 CDD:200456 218/390 (56%)
Alpha-amylase 54..342 CDD:278554 172/297 (58%)
Aamy_C 405..493 CDD:214749 53/87 (61%)
Amy2a1XP_036019386.1 AmyAc_bac_euk_AmyA 25..413 CDD:200456 218/390 (56%)
Aamy_C 420..507 CDD:214749 53/86 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 273 1.000 Domainoid score I1776
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000926
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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