DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and HB-12

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_191748.1 Gene:HB-12 / 825362 AraportID:AT3G61890 Length:235 Species:Arabidopsis thaliana


Alignment Length:41 Identity:16/41 - (39%)
Similarity:19/41 - (46%) Gaps:5/41 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 TPPRALAP--DA--KSPEIMFRGHTHVSPALEEGLKADAVD 207
            |.|.|::|  ||  ||||.. |..|..||:.....|....|
plant   526 TSPSAVSPSEDAGCKSPESK-RLRTEDSPSCSSADKPSTTD 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649
HB-12NP_191748.1 Homeodomain 33..83 CDD:459649
HALZ 85..126 CDD:460477
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.