DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HAT3

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_191598.1 Gene:HAT3 / 825210 AraportID:AT3G60390 Length:315 Species:Arabidopsis thaliana


Alignment Length:263 Identity:51/263 - (19%)
Similarity:88/263 - (33%) Gaps:110/263 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DDPQTYNEFDFLNHLRGTIGVPNIIQH-------FQVGRERVMMM---DKYLATLEQFRTRCDDR 110
            ||.|     |:.|:...:...|:.:.|       :.:...:::.:   |||            .|
plant    37 DDVQ-----DYPNNANDSKPSPDPVTHLRWDDPYYDIAWRQIVEVAGDDKY------------GR 84

  Fly   111 RISDLNIIKIAVRLVNVLEAIHQKGVIHRDLKTTNVMIRSRGQSEVNLVLIDYGLSTFNGTPPRA 175
            :|    ::..|.||....|..|.|  :.:.||.|   :....:|:..||.:.:||::.|      
plant    85 KI----VVFSACRLPPCHEIDHVK--LLQYLKHT---LDQYVESDYTLVYLHHGLTSEN------ 134

  Fly   176 LAPDAKSPEIMFRGHTHVSPALEEGLKADAVDDLQMLAIMLIWCSAYHPFGPIGQESSRK----- 235
                              .|:|  |...||.                       :|..||     
plant   135 ------------------KPSL--GWLRDAY-----------------------REFDRKYKKNI 156

  Fly   236 KAEFITNPVKYVKGRPFLRPLMTAIMAQPRGTR---PNYQAILDAAAGPFPIDDIRDSLKTEISL 297
            ||.:|.:|..::|   .|..|...|::...|.:   .||            :.|:.:.:|.|  .
plant   157 KALYIVHPTMFIK---TLLILFKPIISFKFGRKIFYANY------------LSDLEEHMKVE--Q 204

  Fly   298 LGV 300
            ||:
plant   205 LGI 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649
HAT3NP_191598.1 HD-ZIP_N 19..118 CDD:461370 21/106 (20%)
Homeodomain 161..215 CDD:459649 14/64 (22%)
HALZ 217..260 CDD:128634
Blue background indicates that the domain is not in the aligned region.

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