DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HB21

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_179445.1 Gene:HB21 / 816370 AraportID:AT2G18550 Length:220 Species:Arabidopsis thaliana


Alignment Length:109 Identity:30/109 - (27%)
Similarity:40/109 - (36%) Gaps:30/109 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 PCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQK------------------- 416
            |..|..|     |:....::||..||...:..|.|...|.:..|:|                   
plant    24 PLVPQQG-----GEAKPTRRRKRKSKSVVVAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKL 83

  Fly   417 ----RWELARNLQLTERQVKIWFQNR--RMKNKKNSQRQANQQN 454
                :..||..|.|..|||.:|||||  |.|||:........:|
plant    84 ESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDEYTKLKN 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 24/80 (30%)
HB21NP_179445.1 HOX 61..114 CDD:197696 15/52 (29%)

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