Protein Alignment Abd-B and Hoxa5

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_077365.1
• Gene: Hoxa5 / 79241
• RGDID: 620609
• Length: 381
• Species: Rattus norvegicus
• Alignment Length: 394
• Identity: 87/394 - (22%)
• Similarity: 153/394 - (38%)
• Gaps: 115/394 - (29%)

  Fly   128 QQQQQLATTPVAGALSPAQT-PTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQ 191
            ::::::|.|....|..|::. ||.|...:   .||..||.        ...:|...::.:.:...
  Rat    14 ERRRRVAGTRPGSARHPSRLHPTPPLLHE---FTSRGHQA--------GFTTGQQKHVIRSRTPY 67

  Fly   192 NAAVAPGQTQIVAPTTA---------SVSPSSVSSQKEDINMSIQLAPLHIPAIRA----GPGFE 243
            ..|.. |..::..|..:         ::...:.:|.|...::..|::...:.:...    ||.::
  Rat    68 LGAYV-GGNRVHVPVISIIHHKLCKGAIDAQTTASHKSSTHIKKQMSSYFVNSFCGRYPNGPDYQ 131

  Fly   244 T----DTSA-------AVKRHTAHWAYNDEGF--------NQHYGSGYYDRKH-----------M 278
            .    |.|:       :...|:..:.|...|.        :.|:|||...|.:           .
  Rat   132 LHNYGDHSSVSEQFRDSASMHSGRYGYGYNGMDLSVGRSGSGHFGSGERARSYAAGASAAPAEPR 196

  Fly   279 FAYPYPETQFPVGQYWGPNYRPDQTTSAAAA-------------------AAYMNEAERHVSAAA 324
            ::.|...|..|         .||....:|.|                   .|..|....|:|  :
  Rat   197 YSQPATSTHSP---------PPDPLPCSAVAPSPGSDSHHGGKNSLGNSSGASANAGSTHIS--S 250

  Fly   325 RQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTP-NPGLHEWTGQVSV- 387
            |:.|...|.:..:.|..|...|.:..||                  |..| .|.::.|..::.:
  Rat   251 REGVGTASAAEEDAPASSEQAGAQSEPS------------------PAPPAQPQIYPWMRKLHIS 297

  Fly   388 ---------RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNK 443
                     ::.|..|:::|||||||||.||.|:::::|.|:|..|.|:|||:||||||||||.|
  Rat   298 HDNIGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 362

  Fly   444 KNSQ 447
            |:::
  Rat   363 KDNK 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	32/55 (58%)
Hoxa5	NP_077365.1	Homeodomain	307..363	CDD:459649	32/55 (58%)