DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and Mnx1

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001258203.1 Gene:Mnx1 / 682076 RGDID:1588091 Length:403 Species:Rattus norvegicus


Alignment Length:448 Identity:100/448 - (22%)
Similarity:144/448 - (32%) Gaps:187/448 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 TTPVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQ 199
            :.|:|...|.|.||:||.                   ...|...|.||.                
  Rat    25 SAPLALVTSLAATPSGPG-------------------RGGSGGGGTSSG---------------- 54

  Fly   200 TQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPG--FETDTSAAVKRHTAHWAYNDE 262
                    ||.|.|..||:                 ..|.||  ...::.:..:..|||.|...:
  Rat    55 --------ASRSCSPASSE-----------------ATAAPGDRLRAESPSPPRLLTAHCALLPK 94

  Fly   263 -GFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQ 326
             ||....|.|                   |...||..........|||||        .:|||..
  Rat    95 PGFLGAGGGG-------------------GAAGGPGTPHHHAHPGAAAAA--------AAAAAAA 132

  Fly   327 SVEGTSTSSYEPPTYSSPGG------------LRGYPSENYSSSGASGGLS------------VG 367
            :..|.:...:       |||            |.|:|..:||::.|:..|:            |.
  Rat   133 AAGGLALGLH-------PGGAQGGAGLPAQAALYGHPVYSYSAAAAAAALAGQHPALSYSYPQVQ 190

  Fly   368 AVGPCTPN-------------------------PGLHEWTGQVS---VRKKRKPYSKF---QTLE 401
            ...|..|.                         |.:.:::.|..   :.|.|:|.:.|   |.||
  Rat   191 GAHPAHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFSSQAQSNLLGKCRRPRTAFTSQQLLE 255

  Fly   402 LEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQ------RQANQQNNNNNSS 460
            ||.:|..|.|:|:.||:|:|.:|.|||.||||||||||||.|::.:      ::|.:|..:...:
  Rat   256 LEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGSGGGA 320

  Fly   461 SNHNHAQATQQHHSG-----------------------------HHLNLSLNMGHHAA 489
            ......:.|::...|                             .|...|..:|.|||
  Rat   321 GKGGTEEKTEEELLGPPVSGDKASGRRLRDLRDSDPDEDEDDEEDHFPYSNGVGAHAA 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 33/58 (57%)
Mnx1NP_001258203.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..81 19/108 (18%)
Homeodomain 242..298 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..403 10/80 (13%)

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