DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and vox

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_571773.1 Gene:vox / 64807 ZFINID:ZDB-GENE-010108-1 Length:242 Species:Danio rerio


Alignment Length:114 Identity:38/114 - (33%)
Similarity:56/114 - (49%) Gaps:1/114 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   334 SSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQ 398
            ||.|.|...:|..... ||.:.:|..:||..|..|...|......|:.....:.|:.|..::..|
Zfish    65 SSKETPAQVTPRNCSS-PSFSENSGYSSGYESEAAASECASVEDGHDAEKDGATRRIRTKFTPEQ 128

  Fly   399 TLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQ 447
            ..:|||.|..:.|:...:|.:.|..|.|:|.|::.||||||||.|:..|
Zfish   129 IDKLEKIFNKHKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKREVQ 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 22/55 (40%)
voxNP_571773.1 Homeodomain 118..174 CDD:459649 22/55 (40%)

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