DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and NKX2-4

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_149416.1 Gene:NKX2-4 / 644524 HGNCID:7837 Length:354 Species:Homo sapiens


Alignment Length:312 Identity:83/312 - (26%)
Similarity:118/312 - (37%) Gaps:87/312 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 PQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVS----PSSVSSQKEDINMSIQL 228
            |:..||.|| |...|.:::..::.:.|:......:.||..|:.:    |...|||...:   ..:
Human     5 PKHTTPFSV-SDILSPIEETYKKFSGAMDGAPPGLGAPLGAAAAYRAPPPGPSSQAATV---AGM 65

  Fly   229 APLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQY 293
            .|.|   ..||.......:||.....|...|                 ||   |...:|||.|  
Human    66 QPSH---AMAGHNAAAAAAAAAAAAAAAATY-----------------HM---PPGVSQFPHG-- 105

  Fly   294 WGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRG--------- 349
                          |..:|.|               |...:..|.|.|:.  |:||         
Human   106 --------------AMGSYCN---------------GGLGNMGELPAYTD--GMRGGAATGWYGA 139

  Fly   350 YPSENYSS----SGASGGLSVGAVGPCTP--------NPGLHEWTGQVSVRKKRKP-YSKFQTLE 401
            .|...|||    .|.|.|::|..:|..|.        .| ||......:.|:||:. :|:.|..|
Human   140 NPDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSLGP-LHAAAAAAAPRRKRRVLFSQAQVYE 203

  Fly   402 LEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQ 453
            ||:.|....|:|..:|..||..:.||..||||||||.|.|.|:.::.:|.||
Human   204 LERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQ 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 26/56 (46%)
NKX2-4NP_149416.1 Homeodomain 190..246 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..329 3/10 (30%)

Return to query results.
Submit another query.