DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and hoxa9b

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_571608.1 Gene:hoxa9b / 58048 ZFINID:ZDB-GENE-000823-2 Length:258 Species:Danio rerio


Alignment Length:412 Identity:108/412 - (26%)
Similarity:135/412 - (32%) Gaps:167/412 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LHTTSHHHSAH-PHLQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLV 106
            |.|.|::..:| ||     :...|.....|...|:|||.::.|                      
Zfish     4 LGTLSYYADSHLPH-----ENDDHLAPRFSSGPVVQQQSRELT---------------------- 41

  Fly   107 AVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGA-LSPAQTPTGPSAQQQQHLTSPHHQQLPQQ 170
                          .|:..:|:.....|.:.:.|| .||.| |||.|.....::   ||      
Zfish    42 --------------LLEYSEQEPYTFQAKSSIFGASWSPVQ-PTGASIAYHPYI---HH------ 82

  Fly   171 QTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPA 235
                ..::|.|..                        |||.|.:             |.||  ||
Zfish    83 ----PCSTGDSDG------------------------ASVRPWA-------------LEPL--PA 104

  Fly   236 IRAGP--GFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNY 298
            :   |  |..|||...:|            .....|||                           
Zfish   105 L---PFTGLSTDTHQDIK------------LEPLVGSG--------------------------- 127

  Fly   299 RPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGL-RGYPSENYSSSGASG 362
                            |...|....|......|.|....|....|.|.. ...|:|.......| 
Zfish   128 ----------------ECTTHTLLVAETDNNTTQTERKVPDDAVSNGSHDEKIPAETKLDLDPS- 175

  Fly   363 GLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLT 427
                    .|..:..|..|....|.||||.||:|.||||||||||||.|:|:.:|:|:||.|.||
Zfish   176 --------KCNQDNPLSNWLHAKSTRKKRCPYTKHQTLELEKEFLFNMYLSRDRRYEVARLLNLT 232

  Fly   428 ERQVKIWFQNRRMKNKK-NSQR 448
            ||||||||||||||.|| |..|
Zfish   233 ERQVKIWFQNRRMKMKKCNKDR 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 40/52 (77%)
hoxa9bNP_571608.1 Hox9_act 1..174 CDD:282473 57/321 (18%)
Homeobox 195..248 CDD:278475 40/52 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7557
eggNOG 1 0.900 - - E1_KOG0487
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D414477at33208
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - otm24582
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.940

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