Protein Alignment Abd-B and hoxc9a

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_571603.3
• Gene: hoxc9a / 58043
• ZFINID: ZDB-GENE-000328-5
• Length: 270
• Species: Danio rerio
• Alignment Length: 215
• Identity: 71/215 - (33%)
• Similarity: 101/215 - (46%)
• Gaps: 47/215 - (21%)

  Fly   283 YPETQF-PVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAAR------QSVEGT-STSSY--- 336
            ||...| |....:..::.|..:.|:.....|.::.  |:...:|      :.:.|| |...|
Zfish    60 YPSCSFAPKPPVFTTSWAPVHSQSSVVYHPYTHQP--HLGTDSRYVRSWLEPIPGTVSFPGYAGN 122

  Fly   337 ------EPPTYSSP--GGLRGYPSENYSSSGASGGLSVGAVGPCTPNP-------GLHE------ 380
                  :|.|:..|  |...|.....|:.......:.:......||:|       |.|:
Zfish   123 SRHYGLKPDTFQDPRAGDCLGSNGRTYTDYLYCSAVDIREKQQNTPSPETESLSSGKHKDDKAEL 187

  Fly   381 --------WTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQN 437
                    |....|.||||.||:|:||||||||||||.|:::.:|:|:||.|.||||||||||||
Zfish   188 DPNNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQN 252

  Fly   438 RRMKNKKNSQRQANQQNNNN 457
            ||||.||     .|::.|::
Zfish   253 RRMKMKK-----MNKEKNDS 267

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	41/55 (75%)
hoxc9a	NP_571603.3	Hox9_act	11..189	CDD:461369	24/130 (18%)
		Homeodomain	203..251	CDD:459649	34/47 (72%)