Protein Alignment Abd-B and hoxc12a

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001104229.1
• Gene: hoxc12a / 562600
• ZFINID: ZDB-GENE-000822-6
• Length: 274
• Species: Danio rerio
• Alignment Length: 296
• Identity: 86/296 - (29%)
• Similarity: 126/296 - (42%)
• Gaps: 83/296 - (28%)

  Fly   173 PNSVASG---ASSNLQQQQQQQNAAVAP--------GQTQIVAPTTASVSPSSVSSQKEDINMSI 226
            ||..|||   |........::.|....|        |..|....:..|::||        .|.|.
Zfish    27 PNFRASGGQLAGLPSLSYPRRDNVCSLPWNPSESCNGYPQSYFSSPVSINPS--------FNRSC 83

  Fly   227 QLAPLHIPAIRAGPGFETDTSA----AVKRH---------TAHWAYNDEGFNQHYGSGYYDRKHM 278
            ::..|.......|....|..|.    ::||.         :.|..:|..|.:..:....|..:|:
Zfish    84 EITRLEESKCYYGNSSSTRDSCSDNNSLKREERARDTSVSSDHGMHNGMGNSGTFSKYDYGTEHL 148

  Fly   279 FAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSS 343
                   ||.|      |:.   |:..:.::::.:|              ||..||:.:|.|..|
Zfish   149 -------TQDP------PSC---QSLESDSSSSVLN--------------EGGKTSASDPQTLVS 183

  Fly   344 PGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLF 408
            .|        |::|:.|.||   ||  |..|   :|..|     |||||||||.|..|||.||:.
Zfish   184 QG--------NHASNIAGGG---GA--PWYP---MHTRT-----RKKRKPYSKLQLAELEGEFML 227

  Fly   409 NAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            |.::::|:|.||:..|.|:::||||||||||||.|:
Zfish   228 NEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKR 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	34/55 (62%)
hoxc12a	NP_001104229.1	Homeodomain	207..263	CDD:459649	34/55 (62%)