DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and POU3F4

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_000298.3 Gene:POU3F4 / 5456 HGNCID:9217 Length:361 Species:Homo sapiens


Alignment Length:436 Identity:89/436 - (20%)
Similarity:127/436 - (29%) Gaps:159/436 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 AVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQ-- 128
            |..||:|.|:|     .||...|:..               |..||..|....|:.||....|  
Human     2 ATAASNPYSIL-----SSTSLVHADS---------------AGMQQGSPFRNPQKLLQSDYLQGV 46

  Fly   129 --------------------QQQQLATTPVAGALSPAQTPTGPSAQQQQ-----HLTSPH--HQQ 166
                                ....|||:|:      .|....|..:..|     |..|||  |..
Human    47 PSNGHPLGHHWVTSLSDGGPWSSTLATSPL------DQQDVKPGREDLQLGAIIHHRSPHVAHHS 105

  Fly   167 LPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPL 231
             |....||  |.|||.             ||..:     .|:|..|.:|.||             
Human   106 -PHTNHPN--AWGASP-------------APNPS-----ITSSGQPLNVYSQ------------- 136

  Fly   232 HIPAIRAGPGFE----------TDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPET 286
                    |||.          |...||....:.|....:                      |..
Human   137 --------PGFTVSGMLEHGGLTPPPAAASAQSLHPVLRE----------------------PPD 171

  Fly   287 QFPVGQYWGPNYRPDQTTSAAAAAAYMNE-AERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGY 350
            ...:|.:...::..::|.::.....:..: .:|.:.....|:..|.:..:.....:|.....|  
Human   172 HGELGSHHCQDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICR-- 234

  Fly   351 PSENYSSSGASGGLSVGAVGPCTPNPGLHEW-------TG----------QVSVRKKRKPYSKFQ 398
                      ...|.:.....|...|.|::|       ||          |...||||.......
Human   235 ----------FEALQLSFKNMCKLKPLLNKWLEEADSSTGSPTSIDKIAAQGRKRKKRTSIEVSV 289

  Fly   399 TLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            ...||..||.....:.|:...||.:|||.:..|::||.|||.|.|:
Human   290 KGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKR 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 19/52 (37%)
POU3F4NP_000298.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 99..131 14/52 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..192 7/69 (10%)
POU 186..260 CDD:197673 11/85 (13%)
Homeobox 281..335 CDD:365835 19/53 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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