Protein Alignment Abd-B and HGTX

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001368954.1
• Gene: HGTX / 53446
• FlyBaseID: FBgn0040318
• Length: 587
• Species: Drosophila melanogaster
• Alignment Length: 559
• Identity: 118/559 - (21%)
• Similarity: 188/559 - (33%)
• Gaps: 133/559 - (23%)

  Fly    13 QQQQEQQHLQEQQQHLQQLHHHAHHH------LPQPLHTTSHHHSA----------HPHLQ---- 57
            ||..|......:...:..::.:..||      ...|......||.|          |.|..
  Fly    60 QQHPECLDYGHEAPEMDLINPYMRHHSFAAAAQGSPPSAAQRHHLAAAMSNGFADVHAHAMAAAD 124

  Fly    58 -QQQQQQQHAVVA---------------------SSPSSVLQQQ-----QQQSTPTTHSTPTHAV 95
             |||....|:..|                     |||..:|:..     :...:|:|...|..:.
  Fly   125 YQQQLADYHSAAAAAAVYANNNNNNNNNSSNNNNSSPLMLLKAAHGGGLKDSDSPSTTPPPASSR 189

  Fly    96 MYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSPAQT-------PTGPSA 153
            ::.|..|.|    :.:|..:|...........|:.        :||..|.||       |.|.:.
  Fly   190 LHSDSSPSP----RYEHNSSPGVDSAKSYALSQRS--------SGAEDPCQTSESASPPPQGQND 242

  Fly   154 QQQQHLTS-----PHHQQLPQQQTPNSVASG----ASSNLQQQQQQQNAAVAPGQTQIVAPTT-- 207
            ...::|:|     .||..:......|:..:|    .::|.....:...:.:.|....:.:.||
  Fly   243 YSPENLSSQRAKFQHHHGVNPLALHNANHAGNPGCHNNNNHMDHKLPLSFLGPPLAALHSMTTEM 307

  Fly   208 --ASVSPSSVSSQKEDINMSIQLAP-LHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYG 269
              ..|..||.|:.    .:|...:| .|:.:.|...|..:.:|.......:..|.|..|.:.
  Fly   308 KGQGVGGSSASAN----GLSYSHSPNSHLISDRGSGGSSSSSSTTTTNTNSQGAPNPHGIDT--- 365

  Fly   270 SGYYDRKHMFAYPYPETQFPVGQYWG---PNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEG- 330
                    :.:.|.|.|...:....|   |.:      |.|||||.|.:.......|..::..|
  Fly   366 --------ILSKPPPVTSAGLSALTGAGIPRF------SIAAAAAGMAQYLSQSQGAPLKTHAGH 416

  Fly   331 --TSTSSYEPPTYSSPGGLRGYPSENYS-----SSGASGGLSVGAVGPCTPNPGLHEWTGQVSVR 388
              ..|..|.|       ||:|..:...:     |:..|..||         ....|..:.....:
  Fly   417 IVDRTHLYWP-------GLQGLVANPIAWRERLSNTMSANLS---------QSHQHHPSNDKDGK 465

  Fly   389 KK--RKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQAN 451
            ||  |..:|..|...|||.|....|::..:|.:||..|.::|.|||:||||||.|.:|....:..
  Fly   466 KKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMA 530

  Fly   452 QQNNNNNSSSNHNHAQATQQHHSGHHLNLSLNMGHHAAK 490
            ......:.....|....::...|.   |.||:||...|:
  Fly   531 TAKRKQDDMGGDNDGDCSETMDSD---NESLDMGESPAQ 566

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	25/57 (44%)
HGTX	NP_001368954.1	ROM1	179..>388	CDD:227709	43/235 (18%)
		Homeodomain	465..523	CDD:459649	25/57 (44%)