Protein Alignment Abd-B and hoxa1

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001008017.1
• Gene: hoxa1 / 493379
• XenbaseID: XB-GENE-480737
• Length: 323
• Species: Xenopus tropicalis
• Alignment Length: 345
• Identity: 86/345 - (24%)
• Similarity: 127/345 - (36%)
• Gaps: 100/345 - (28%)

  Fly   150 GPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVS--- 211
            |...|...|....|||....|...|...|...::.......||  .:||.:.......|.||
 Frog    56 GRGVQISSHPHHHHHQAGAFQHHNNLGMSYTHTSCGSNYGMQN--FSPGYSHFPINQEADVSAGF 118

  Fly   212 PSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRK 276
            |.||                          :..:.:::|.:|..|.:|.:       ||.:|...
 Frog   119 PQSV--------------------------YSGNIASSVVQHHQHQSYIE-------GSAHYIHH 150

  Fly   277 HMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNE-AERHVSAAARQSVEGTSTSSYEPPT 340
                                :|.|||..|   .|.|.|. :..|:|   ::.|      ...|.:
 Frog   151 --------------------SYGPDQNIS---VANYNNNVSSLHIS---QREV------CRSPSS 183

  Fly   341 YSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKE 405
            .:|||     |::.:.      .:.|....|.|...|.:.:.||.:.  .|..::..|..|||||
 Frog   184 ETSPG-----PAQTFD------WMKVKRNPPKTGKAGEYGFAGQPNT--ARTNFTTKQLTELEKE 235

  Fly   406 FLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK----------------NSQRQANQQN 454
            |.||.|:::.:|.|:|..|||.|.||||||||||||.||                :.::......
 Frog   236 FHFNKYLTRARRVEIAAALQLNETQVKIWFQNRRMKQKKREKEGLLPISPSASTGSDEKSEELSE 300

  Fly   455 NNNNSSSNHNHAQATQQHHS 474
            .:|:|....:.|.:|..|.|
 Frog   301 KSNSSPCAPSPASSTSDHLS 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	30/55 (55%)
hoxa1	NP_001008017.1	Homeodomain	221..274	CDD:459649	30/52 (58%)