DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and emx1

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001005459.1 Gene:emx1 / 448058 XenbaseID:XB-GENE-920144 Length:233 Species:Xenopus tropicalis


Alignment Length:229 Identity:57/229 - (24%)
Similarity:87/229 - (37%) Gaps:53/229 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 AYPYP-------ETQFPVGQYWGPNYRPDQTTSAAAAAAYMN------EAERHVSAAARQSVEGT 331
            |.|||       .:.||               |.|..:.|.|      |...|..........|.
 Frog    32 ALPYPGAPAEAFVSGFP---------------SPAGRSLYNNPELVFPETVSHPPLTVHPHQLGA 81

  Fly   332 S----TSSYEPPTYSSPGGLRGYP----SENYSSSGASGGLSVGAV---GPCTPNPGLHEWTGQV 385
            |    ..|:..|.:..|  |..||    :..:......|.:|..::   ||....|         
 Frog    82 SHLQHPHSFFAPQHRDP--LNFYPWVLRNRFFGHRFQGGDVSQESLLLHGPFARKP--------- 135

  Fly   386 SVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQA 450
              ::.|..:|..|.|.||:.|..|.||...:|.:||.:|.|:|.|||:||||||.|.|:....:.
 Frog   136 --KRIRTAFSPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKRQKLEEE 198

  Fly   451 NQQNNNNNSSSNH-NHAQATQQHHSGHHLNLSLN 483
            ...::.....|:| |..:...:..:|..::::.|
 Frog   199 GPDSDQKKKGSHHINRWRLATKQPNGEDIDVTSN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 26/55 (47%)
emx1NP_001005459.1 Homeodomain 136..192 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..233 5/41 (12%)

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