Protein Alignment Abd-B and slou

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001262808.1
• Gene: slou / 42547
• FlyBaseID: FBgn0002941
• Length: 698
• Species: Drosophila melanogaster
• Alignment Length: 546
• Identity: 132/546 - (24%)
• Similarity: 176/546 - (32%)
• Gaps: 223/546 - (40%)

  Fly     1 MQQH-HLQQQQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQ 64
            :||| ||        .|..|.|...|||   :|||.|.|...|.|..||.| .|||
  Fly   182 LQQHPHL--------LQNPQFLAAAQQH---MHHHQHQHHQHPAHPHSHQH-PHPH--------- 225

  Fly    65 HAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQ 129
                                |..|..|..:.::              ||.||...
  Fly   226 --------------------PHPHPHPHPSAVF--------------HLRAPSSS---------- 246

  Fly   130 QQQLATTPVAGALSPAQTPTGPSAQQQQHLT--------SPHHQQLPQQQTPNSVASGASSNLQQ 186
                :|.|.:.|.||...||.|:....|.::        .||..|.||||   .||  |.|::..
  Fly   247 ----STAPPSPATSPLSPPTSPAMHSDQQMSPPIAPPQNPPHSSQPPQQQ---QVA--APSDMDL 302

  Fly   187 QQQQQNAAVAPGQTQ-----IVAPTTASVSPSSVSSQK-----------EDINMSIQLAPLHIPA 235
            ::.:..||||...||     .:|..:.|||.:|:|...           .|....|||..|...|
  Fly   303 ERIKLVAAVAARTTQASSTSALASASNSVSNASISISNSSSGSPSGRDLSDYGFRIQLGGLAAAA 367

  Fly   236 IRAGPGFETDTSAAVKRHTAHWAY-------------NDEGFNQHYGSGYYDRKHMFAYPYPETQ 287
            ..|         ||..|..|...|             |||..|.
  Fly   368 AAA---------AATSRQIAAATYARSDTSEELNVDGNDEDSND--------------------- 402

  Fly   288 FPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSA-----AARQSVEGTSTSSYEPPTYSS---P 344
               |.:..|:..|...|.:..::|..|.:....||     ||.:.:..:..:..:|..::.   |
  Fly   403 ---GSHSTPSVCPVDLTRSVNSSAAANPSSASTSASSDRDAATKRLAFSVENILDPNKFTGNKLP 464

  Fly   345 GGLRGYP-------------------SENYSS--------------------------------- 357
            .|..|:|                   ||:.|:
  Fly   465 SGPFGHPRQWSYERDEEMQERLDDDQSEDMSAQDLNDMDQDDMCDDGSDIDDPSSETDSKKGGSR 529

  Fly   358 --SGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWEL 420
              .|.|||   |..|...|             |:.|..::..|.:.||.:|....|:|..:|..|
  Fly   530 NGDGKSGG---GGGGGSKP-------------RRARTAFTYEQLVSLENKFKTTRYLSVCERLNL 578

  Fly   421 ARNLQLTERQVKIWFQNRRMKNKKNS 446
            |.:|.|||.||||||||||.|.||.:
  Fly   579 ALSLSLTETQVKIWFQNRRTKWKKQN 604

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	26/55 (47%)
slou	NP_001262808.1	Homeodomain	546..602	CDD:459649	26/55 (47%)