Protein Alignment Abd-B and HHEX

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 346
• Identity: 77/346 - (22%)
• Similarity: 130/346 - (37%)
• Gaps: 113/346 - (32%)

  Fly   119 QQQLQQQQQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSN 183
            :|:....:.|.::..:.:|||....               :.:||...:|:.    |:|:|:||
  Fly    19 EQKSSSHRSQSRRGSSQSPVAVTAG---------------IATPHALAMPKA----SLATGSSS- 63

  Fly   184 LQQQQQQQNAAVAPGQTQIVAPTTAS----VSPSSVSSQ--KEDINMSIQLAPLHIPAIRAGPGF 242
                     ||..|      :|::|:    :|..:.::|  .:.::.|..|||   .::|..|.:
  Fly    64 ---------AAPTP------SPSSATNIYDLSREAAAAQYAMKSMDSSAVLAP---TSLRFNPIY 110

  Fly   243 ETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAA 307
             .|.::...:.......|...|..|:                                 |..:.|
  Fly   111 -PDPASLFYQQVLQLQKNPSLFMPHF---------------------------------QAAAVA 141

  Fly   308 AAAAYMNEAERHVSAAARQSVEGTS-TSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGP 371
            ||||                |:.|: ...|.|.|..    ..|:|:.          .|..|...
  Fly   142 AAAA----------------VQPTAYCDQYSPFTMD----CEGFPNP----------ASAAAALY 176

  Fly   372 CTPNPGLHEWTGQVSVRKK--RKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIW 434
            |...|....:.....|::|  :..::..||..||..|..:.|:|.::|..||..|:||:||||.|
  Fly   177 CNAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTW 241

  Fly   435 FQNRRMKNKKN--SQRQANQQ 453
            |||||.|.::.  |:|.|:.|
  Fly   242 FQNRRAKWRRANLSKRSASAQ 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	25/57 (44%)
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/50 (48%)