DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and NK7.1

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster


Alignment Length:520 Identity:143/520 - (27%)
Similarity:200/520 - (38%) Gaps:137/520 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LQQQQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHAVVAS 70
            ::.||||||||:|.|      ||||.|||                      ||||||||.....|
  Fly    28 VKDQQQQQQQQQQLH------HLQQQHHH----------------------QQQQQQQQQQQSNS 64

  Fly    71 SPSSVLQQQQQQSTPTT---HSTPTHAV------------------------MYEDPPPVPLVAV 108
            ....:.......|:|.|   .|..||.|                        ...|.||...:..
  Fly    65 DLYKMACNGYNYSSPLTIPPTSMTTHMVSPIGNSKEKLVNMLRVRDNNNMASTISDSPPTTFLQK 129

  Fly   109 QQQHLPAPQ------QQQQLQQQ--QQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTSPHHQ 165
            |.:.:.||:      |.||.|||  |.|||::..:||.      ..|..||......|:    :.
  Fly   130 QLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPA------ITTTPGPPTNWHAHV----YD 184

  Fly   166 QLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQ----IVAP-------TTASVSPSSVSSQK 219
            :||...||:|:|.....:..::::.:.|..|.|..:    |:.|       .::|:|.|..|.::
  Fly   185 RLPPHPTPHSIADILGMSFVKKERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEE 249

  Fly   220 EDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYP 284
                 |..:|.....|..|.....|.|:|.|....      |:..|........|..:.   |.|
  Fly   250 -----SAAVAGATSAATAAAAVAATITAATVATPL------DQPLNLCVVKKSRDSNNS---PMP 300

  Fly   285 ETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEP---PTYSSPGG 346
            .|:  ..|..|.:....:::...||                :..:.:||.:..|   ||.||...
  Fly   301 ATK--QSQILGKSATKKESSGKPAA----------------KKKKLSSTVALPPDISPTGSSDSL 347

  Fly   347 LRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEW-----TGQVSVRKKRKPYSKF---QTLELE 403
            :|.....|.||   |.|.:|.|......|..|...     :|....|:|:|..:.|   |..|||
  Fly   348 MRDKLMANNSS---SPGSNVNAQMQSNANSTLETTEDDSDSGSTDARRKKKARTTFTGRQIFELE 409

  Fly   404 KEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNHNHAQA 468
            |.|....|:|..:|.|:|:.|.:||.||||||||||.|.||       |.|..||.::.|..:.|
  Fly   410 KMFENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKK-------QDNVTNNEAAEHKSSNA 467

  Fly   469  468
              Fly   468  467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 28/55 (51%)
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 26/51 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 42 1.000 Inparanoid score I5492
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.050

Return to query results.
Submit another query.