Protein Alignment Abd-B and CG4328

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 480
• Identity: 102/480 - (21%)
• Similarity: 159/480 - (33%)
• Gaps: 157/480 - (32%)

  Fly   108 VQQQHLPAPQQQQQLQQQQQQQQQQLAT--TPVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQ 170
            :.:.|   |.|........:.|||||..  .|..|.|:......|    .::.||:|     ...
  Fly     2 IDEHH---PMQIGMFPMDIKCQQQQLGAGQLPQTGGLNQLLLLNG----NERMLTTP-----TTA 54

  Fly   171 QTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTA--------SVSPSSVSSQKEDINMSIQ 227
            .|...||:|.|::.:       |.||..........|.        |.:.||.||.....||:|.
  Fly    55 ATSVVVAAGRSASTK-------AGVAHNDKMASVSRTVNGSCSNHNSSNSSSSSSTNSSSNMAIN 112

  Fly   228 LAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHM-------------- 278
            ..|:.:     |||    |...:...|.|            |.|..:..|.
  Fly   113 KQPMGM-----GPG----TGTGMGTGTGH------------GPGPPNHTHCNRITLGECSLNGMD 156

  Fly   279 -FAYPY--PET----QFPVGQYWGPNYRPDQTTSAAAAAAYMNE--------AERHVSAAARQSV 328
             ||.|.  |..    |.|:|.  ..|.........|.|:..:::        .:|::......|.
  Fly   157 GFATPAAPPSASNTPQAPLGM--ASNSGMGMELGLAMASPQLSQCAHCCQPICDRYIMRVVENSF 219

  Fly   329 -EG----TSTSSY-EPPTYSSPGGLRGYPSENYS-----SSGASGGLSVGA---VGPCTPNP--- 376
             ||    |:.|.: ....|:..|.|  |...:|.     :.....||.:.|   |..|..|.
  Fly   220 HEGCLKCTACSLHLVHSCYAREGKL--YCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHL 282

  Fly   377 --------GLHEWTGQVSVRKKRKPYSKFQTLELEKEFL--FNAY-------------------- 411
                    |.....|:..|.|:.:.:.:|. .|.|.|.|  ::.|
  Fly   283 KCFACVVCGALLKKGEQYVVKQGQLFCRFD-YEKEVEMLQGYDFYGDELFPPKLDGRRGPKRPRT 346

  Fly   412 ---------------VS----KQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQ---- 453
                           ||    ::.|..||::..|:.|.|::||||:|.|.|| .|::|.|:
  Fly   347 ILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK-IQKKAKQEPPSK 410

  Fly   454 --NNNNNSSSNHNHAQATQQHHSGH 476
              :::.:|..:.:.:.||:.....|
  Fly   411 GASDSQDSQESLDSSLATKIKDEAH 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	20/93 (22%)
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	10/53 (19%)
		LIM	259..313	CDD:295319	11/54 (20%)
		COG5576	<332..439	CDD:227863	23/105 (22%)
		HOX	341..393	CDD:197696	12/51 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3844
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940