Protein Alignment Abd-B and vvl

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001303384.1
• Gene: vvl / 38752
• FlyBaseID: FBgn0086680
• Length: 742
• Species: Drosophila melanogaster
• Alignment Length: 496
• Identity: 108/496 - (21%)
• Similarity: 155/496 - (31%)
• Gaps: 219/496 - (44%)

  Fly    31 LHH---HAHHHL-PQPLHTTSHHHS---------------AH---PHLQQQQQQQQHAVVASSPS 73
            :||   |.||.: ..|:.|.||.||               ||   .| |.:.|:...|..||:|:
  Fly   381 MHHGGYHPHHDMHGSPMGTHSHSHSPPMLSPQNMQSSAVAAHQLAAHXQSEIQESNSAAAASTPA 445

  Fly    74 SV--LQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATT 136
            |:  |.|||||                          |||.    ||||..||||.||||....|
  Fly   446 SLNSLSQQQQQ--------------------------QQQQ----QQQQHQQQQQHQQQQHTPNT 480

  Fly   137 PVAGALSPA---------QTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGAS----SNLQQQQ 188
            |.:.|.|.|         |:|.|.|:...|...:.::.......|.|:..:..:    .:.||||
  Fly   481 PSSSAGSSATMTSQVMSPQSPLGSSSAGNQANNNNNNNNNNNSSTNNNNNNNNNEEQVKHHQQQQ 545

  Fly   189 QQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRH 253
            |||.|              :|::.::.::...|        |:.
  Fly   546 QQQQA--------------SSIAAAAAAAMYMD--------PMR--------------------- 567

  Fly   254 TAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAER 318
                               |...| ..:|:|. |.|   :..|.:.|           ::.....
  Fly   568 -------------------YQHPH-HPHPHPH-QHP---HLNPAHHP-----------HLFHTSD 597

  Fly   319 HVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTG 383
            .:..:.:|:|.|||::|...|...|..||   |.:..||:..:|..|....|....|| ||:
  Fly   598 QLQHSQQQTVGGTSSNSQLSPGAGSNSGL---PLQPPSSASPAGSASSVLGGHLNLNP-LHQ--- 655

  Fly   384 QVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQR 448
                                                                       ..:.|.
  Fly   656 -----------------------------------------------------------HHHYQH 661

  Fly   449 QANQQNNNNNSSSNHNHAQATQQHHSGHHLNLSLNMGHHAA 489
            ..:||        :|:|.|..||.|:.....|||..|..||
  Fly   662 HHHQQ--------HHHHQQQQQQLHARRLFELSLQFGAAAA 694

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	0/52 (0%)
vvl	NP_001303384.1	POU	212..286	CDD:197673
		Homeobox	307..360	CDD:278475

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3844
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.940