Protein Alignment Abd-B and Hoxd12

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001178832.1
• Gene: Hoxd12 / 366082
• RGDID: 1309797
• Length: 268
• Species: Rattus norvegicus
• Alignment Length: 291
• Identity: 85/291 - (29%)
• Similarity: 119/291 - (40%)
• Gaps: 61/291 - (20%)

  Fly   179 GASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFE 243
            |:..|||.......:.:.|..:|:.|                       |.|:..|. .|.|...
  Rat    13 GSLLNLQSPDSFYFSNLRPNGSQLAA-----------------------LPPISYPR-SALPWAA 53

  Fly   244 TDTSAAVKRHTAHWAYNDEGFNQHY--GSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSA 306
            |..|....:.|...|:.  ||:|.|  |||....:.......||.|...       |.||..|::
  Rat    54 TPASCTPAQPTTASAFG--GFSQPYLTGSGPIGLQSPGTKDGPEDQVKF-------YTPDAATAS 109

  Fly   307 AAAAAYMNEAER------HVSAAARQSVEGTSTSSYEPPTYSSPGG---LRGYPSENYSSSGASG 362
                   .|..|      ..|:....:::||. ..:.....::||.   |:|.|..:.......|
  Rat   110 -------EERSRTRPPFAPESSLVHSALKGTK-YDFAGVGRAAPGSVTLLQGAPCASNFKEDTKG 166

  Fly   363 GLS------VGAVGPCTPN---PGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRW 418
            .|:      |..|..|..:   .||.........|||||||:|.|..|||.|||.|.::::|||.
  Rat   167 PLNLNMAVQVAGVASCLRSSLPDGLPWGAAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRK 231

  Fly   419 ELARNLQLTERQVKIWFQNRRMKNKKNSQRQ 449
            ||:..|.|:::||||||||||||.|:..||:
  Rat   232 ELSNRLNLSDQQVKIWFQNRRMKKKRVVQRE 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	33/52 (63%)
Hoxd12	NP_001178832.1	PRR18	38..>124	CDD:292299	26/125 (21%)
		Homeobox	203..256	CDD:278475	33/52 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0487
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900