DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and en

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_523700.2 Gene:en / 36240 FlyBaseID:FBgn0000577 Length:552 Species:Drosophila melanogaster


Alignment Length:552 Identity:130/552 - (23%)
Similarity:197/552 - (35%) Gaps:164/552 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQQHHLQQQQQQQQQQEQQHLQEQQQHLQQLHHHAHHHLPQPLHTTSHHH--------------- 50
            ||..|.||||||||||:.|||.:.|| |||||.       |.|.....||               
  Fly    20 MQHLHHQQQQQQQQQQQMQHLHQLQQ-LQQLHQ-------QQLAAGVFHHPAMAFDAAAAAAAAA 76

  Fly    51 ---SAHPH---LQQQQQQQQHAVVASSPSS----VLQQQQQQST-------PTTHSTPTHAVMYE 98
               :||.|   |||:..........|:|:|    .:::::..|.       ..||:|.......|
  Fly    77 AAAAAHAHAAALQQRLSGSGSPASCSTPASSTPLTIKEEESDSVIGDMSFHNQTHTTNEEEEAEE 141

  Fly    99 D----------------PPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALS---- 143
            |                |||.                   .|||...:..||.: ::..||    
  Fly   142 DDDIDVDVDDTSAGGRLPPPA-------------------HQQQSTAKPSLAFS-ISNILSDRFG 186

  Fly   144 PAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTA 208
            ..|.| |.|.:.|..:..|......|..||:  |......|:..:|||.||.|            
  Fly   187 DVQKP-GKSMENQASIFRPFEASRSQTATPS--AFTRVDLLEFSRQQQAAAAA------------ 236

  Fly   209 SVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYY 273
                ::.:...|..|......|...|.|.     |....:.::|..|: |......:........
  Fly   237 ----ATAAMMLERANFLNCFNPAAYPRIH-----EEIVQSRLRRSAAN-AVIPPPMSSKMSDANP 291

  Fly   274 DRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEP 338
            ::..:.:.....:|  :||...|.......:|:|::.|....|....:.::..|| .||:||...
  Fly   292 EKSALGSLCKAVSQ--IGQPAAPTMTQPPLSSSASSLASPPPASNASTISSTSSV-ATSSSSSSS 353

  Fly   339 PTYSSPGGLRGYPSENYSSSGASGGLSVGA---------------------------VGPCTPNP 376
            ...|:...|...||....:||:  |::..:                           .|..|...
  Fly   354 GCSSAASSLNSSPSSRLGASGS--GVNASSPQPQPIPPPSAVSRDSGMESSDDTRSETGSTTTEG 416

  Fly   377 GLHE-WTGQV-------------SVRKKRKP-------------YSKFQTLELEKEFLFNAYVSK 414
            |.:| |...|             ..|:.::|             :|..|...|::||..|.|:::
  Fly   417 GKNEMWPAWVYCTRYSDRPSSGPRYRRPKQPKDKTNDEKRPRTAFSSEQLARLKREFNENRYLTE 481

  Fly   415 QKRWELARNLQLTERQVKIWFQNRRMKNKKNS 446
            ::|.:|:..|.|.|.|:||||||:|.|.||::
  Fly   482 RRRQQLSSELGLNEAQIKIWFQNKRAKIKKST 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 23/68 (34%)
enNP_523700.2 Homeodomain 455..511 CDD:459649 21/55 (38%)
Engrail_1_C_sig 512..542 CDD:431338 0/2 (0%)

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